Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_4286 |
Symbol | |
ID | 4024809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 4747345 |
End bp | 4748745 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637964494 |
Product | amidase |
Protein accession | YP_571404 |
Protein GI | 91978745 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.508501 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0108693 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCGG ATCTGCACTA CAAGTCGATC ACCGAACTCT CGGACCTTTA TCGCCGAAAG CAGCTGAAAC CGTCCGAGGT GACGCAGGCG TCGCTCGATC GCATTGCAAA ACTCGATCCG CGCTTCCACG GCTACGCGGT TGTTCTCGCC GAGCGCGCGA TGCAGCAGGC GAAGCGGTCG GACGACGAGA TCGCCAGGGG CATCTGGCGC GGCCCGCTGC ACGGCGTGCC GATCGGCCTC AAGGACCTGT GCTACACGAC CTTTGCACCG ACCGCAGGCG GCACCAAGAT CCACGCCACC TTCGTACCCT CGTTCAACGC GACGATCGTC GATCGACTGG AGCGCGGCGG CGCTGTCTCG CTCGGCAAGC TGAAGATGAC CGAGGGGGCC TACACCAGTC ATCATCCGGA CGACGCTGCG CCGCTCAATC CGTGGAATGT CGATTACTGG GTCGGCTCGT CGTCGAGCGG TTCGGGCGTC GCAACCTCGG CGGGGCTTTG CTACGGCGCG ATCGGCAGCG ATACCGGCGG TTCGATCCGG TTTCCATCGG CGACCTGCGG CCTGACCGGG ATCAAGCCGA CCTGGGGCCG GGTCAGCCGC TACGGCGTGT TTCCGCTGGC GGATTCGCTG GATCACGTCG GCCCGATGTG CCGGAGTGCG GCGGATGCCG CCGCGATGCT CGGCGTCATC GCGGGCGCCG ATCCGAACGA TCCCACCACG TTGCAGGCGC CGGTGCCGAA CTATCTCGCA CAGATCGACG ACGGCGTGCG GGGGCTGCGG ATCGGCATCG ATCGCAGCTA TGCCGAGCAG GGCATCGATC CGCAGGTCGT CGCGGGCTTG CGCGAAGCCG AGCGGACGCT TGCCGATCTC GGCGCGGAGA TCCGCGAGGT GAGGCTTCCC GCCTATGAGA AGCTGGTCGG TCACTGGATC CCGATGTGCT CGGTGGAGAC GGCTGAAGCC CACCTCGCAA CCTACCCGTC GCGCAAATCG GAGTACGGCC CCGATCTTGC GCAACTGATC GAGCAGGGCC ACGCGATGAC CGGGGTCGAG ATCGCGGCGA TCCATCACGA GCGACTCAGA TTCTCCGGCG GGCTGGCGGC GCTGTTCGAG GACATCGACC TGCTGCTGGC GCCGACTATG CCGGTCCCGA TTCCGACGCT GACCAGGATG GGCGAATACG GCGCCGATCC GAATGTCCTG CTGAACATCC TGCGCTTCAC CGCGCCGTTC GACTTCAGCG GCAGCCCGAC CATCACGATG CCGATGGGGA TGGCGTCCGA CGCGATGCCG CTGAGCTTCC AGCTGGTCGG ACCGCATCTG TCCGAGCACG TGCTCGCCCG CGCCGGGCAG GCTTATCAGT CGATCACCGA CTGGCACACC AAGCGTCCTC CGATCGCATG A
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Protein sequence | MTADLHYKSI TELSDLYRRK QLKPSEVTQA SLDRIAKLDP RFHGYAVVLA ERAMQQAKRS DDEIARGIWR GPLHGVPIGL KDLCYTTFAP TAGGTKIHAT FVPSFNATIV DRLERGGAVS LGKLKMTEGA YTSHHPDDAA PLNPWNVDYW VGSSSSGSGV ATSAGLCYGA IGSDTGGSIR FPSATCGLTG IKPTWGRVSR YGVFPLADSL DHVGPMCRSA ADAAAMLGVI AGADPNDPTT LQAPVPNYLA QIDDGVRGLR IGIDRSYAEQ GIDPQVVAGL REAERTLADL GAEIREVRLP AYEKLVGHWI PMCSVETAEA HLATYPSRKS EYGPDLAQLI EQGHAMTGVE IAAIHHERLR FSGGLAALFE DIDLLLAPTM PVPIPTLTRM GEYGADPNVL LNILRFTAPF DFSGSPTITM PMGMASDAMP LSFQLVGPHL SEHVLARAGQ AYQSITDWHT KRPPIA
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