| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4278 |
|---|
| Symbol | |
|---|
| ID | 4024800 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 4741352 |
|---|
| End bp | 4741843 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637964485 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_571396 |
|---|
| Protein GI | 91978737 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5328] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0808908 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCT CGCAACCAGA CGATTCCAAC AATCGCATCG TCGCGGTGAC GCTCGACGAG
GAATCGATCG GGCGCTCCGG GCCGGACATC GAGCACGAGC GCGCCATCGC GATCTACGAT
CTGGTCGAAA AGAACCTGTT CGCGCCGGAG GGCGCGGGCG ATGGGCCGTT CACGCTGCAT
ATCGGCATCA CCGGCAGCCG GCTGATGTTC GACATCCGCC GCGAGGACGG CGCCCCGGTG
ATCACGCATC TGTTGTCGCT GTCGCCGTTC CGCCGCATCG TGAAAGACTA CTTCATGATC
TGCGACAGCT ACTACCAGGC AATCCGCACC GCGACGCCGG ACAAGATCGA AGCCATCGAC
ATGGGCCGTC GCGGCATCCA CGACGAAGGC TCCCGGACGT TGCAGGAACG CCTGTCGGGC
AAAGTCCGGA TCGATTTCGA GACCGCGCGC CGGCTGTTCA CACTGATCTC GGTGTTGCAC
TGGAAGGGAT AA
|
|---|
| Protein sequence | MSTSQPDDSN NRIVAVTLDE ESIGRSGPDI EHERAIAIYD LVEKNLFAPE GAGDGPFTLH
IGITGSRLMF DIRREDGAPV ITHLLSLSPF RRIVKDYFMI CDSYYQAIRT ATPDKIEAID
MGRRGIHDEG SRTLQERLSG KVRIDFETAR RLFTLISVLH WKG
|
|---|
| |