Gene RPD_4271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4271 
Symbol 
ID4024792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4735773 
End bp4736141 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content61% 
IMG OID637964477 
Productcopper resistance protein CopC 
Protein accessionYP_571389 
Protein GI91978730 
COG category[R] General function prediction only 
COG ID[COG2372] Uncharacterized protein, homolog of Cu resistance protein CopC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.153975 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGA AGACTTCGTT AGCAGCCTTC GCGCTGATCG CAGCAACCCT CGGCGCCGGC 
GTCGCCTACG CCCATCCCGA ACTGCAATCG GCCGAGCCCG CTGCCGGAAA GGCGTCGGCT
CCGCCGAAGG AGATCCGCAT TCTGTTCAAC GAGAACATCA TTCCGCGATT CTGCGGGATC
GAACTGAAGG ACCAGGCCGG AAAGGCGATC GCGACCGGAA AGGCAACGAC TGATCCCCGC
AACAAAAAGC TGATGATCGT GCCTCTCAAG GATCAGCTCT CGCCCGGCGA CTACAAGGTC
GATTGGCACG CGGTGTCTGA CGATACGCAC AAGGTCAAGG GCAGTTACTC CTTCAGCGTG
GCGCGCTGA
 
Protein sequence
MAKKTSLAAF ALIAATLGAG VAYAHPELQS AEPAAGKASA PPKEIRILFN ENIIPRFCGI 
ELKDQAGKAI ATGKATTDPR NKKLMIVPLK DQLSPGDYKV DWHAVSDDTH KVKGSYSFSV
AR