| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4263 |
|---|
| Symbol | |
|---|
| ID | 4024784 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 4729102 |
|---|
| End bp | 4730304 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637964469 |
|---|
| Product | protein of unknown function DUF395, YeeE/YedE |
|---|
| Protein accession | YP_571381 |
|---|
| Protein GI | 91978722 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.409839 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.672808 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAATA TGTCCGCCTT GCTGCTCGCG CTGACCGGCC TCTGCATCGG AACGGCGGCC
GGCTTTTTCG TGCGTCTGGC GCGACTGTGC TCGTTCGGCG CGGTCGAGGA CGCGCTGATG
GGCGGCGACA CGCGGCGGCT GCGGATCTTC GGATTGGCGC TCGGCATTGC GCTGATGGGG
ACGCAGGCGC TGGTGATCGG CGGCGTGCTC GACCCCGAAC TCACCAACTA CACCGGCGCC
GCATTGCCGC TGGCATCGAT CATGATCGGC AGCGTGCTGT TCGGCATCGG CATGGCGATG
GTCGGCACCT GTGGCTTCGG TTCGCTGGTG CGGCTCGGCG CCGGGGATTT GCGCAGCTTC
GTGGTGCTTT TGGTGCTCGG CGGCGCGGCC TATGCAACGC TGCGCGGCGT GTTGTCGGGA
TTCCGCATCA CCGTGCTGGA ACGATTGTCG GTGACGATGC CGGAGGGCGT CAGCACCGAC
CTTGCATCGC TGACCCGTTT TGCGTTCGGC CTCGACTTGC GCGCTGCGAT CGCGGCGATC
GGCGGCGGCG TGCTTTGCTT GCTGGCGTTT GGCGACAAGC GGCTGCGGCG AACGCCGCGG
CTGCTGGCGG CCGGCGTCGC GCTCGGCATA CTCACTGTCG CCGGCTGGCT GGCGACGACG
AAGCTGCCCG ACGATTTCGC CGGGCCGGTG CATCCGCAGA GCCTGACCTT CGTCTCGACG
ATCGGCAAGG CGGTCTATGC GGGTCTGCTG AACGCCGCCA ACTTCGCCGA TTTCGGCGTC
GGCACGGTGT TTGGCGTAGT GCTGGGGTCG TTTCTCGCCG CCTGGCGCGC CGATGAGTTG
CGTTGGGAAG CATTCGACGA CGACCACGAG ATGCGCCGTC ACATCGGCGG TGCGGCGCTG
ATGGGACTGG GCGGCATTCT AACCGGCGGC TGCACCATCG GCCAAGGCAT CACAGCAGGC
TCGCTGCTCG CAATCTCCTG GCCGATCGCC ATCGGCGGCA TGATGCTCGG CGCCCGCATG
GGGATCGCCG TGCTGGTCGA CGGCTCTCCG GCAGACCTGA TCCGCCGCCG CTGGGGCAGC
CTGCGTGGCC GTCTGCAGCC GCGCAAGCCG GCCTCGATCA AGGCTTCAGA TAACTCCAGC
CGTCTTCCTG CAACTCCATC AGACGCACCG CGCCGGACGG CACCAGGGTC GCCTGCGGAA
TGA
|
|---|
| Protein sequence | MQNMSALLLA LTGLCIGTAA GFFVRLARLC SFGAVEDALM GGDTRRLRIF GLALGIALMG
TQALVIGGVL DPELTNYTGA ALPLASIMIG SVLFGIGMAM VGTCGFGSLV RLGAGDLRSF
VVLLVLGGAA YATLRGVLSG FRITVLERLS VTMPEGVSTD LASLTRFAFG LDLRAAIAAI
GGGVLCLLAF GDKRLRRTPR LLAAGVALGI LTVAGWLATT KLPDDFAGPV HPQSLTFVST
IGKAVYAGLL NAANFADFGV GTVFGVVLGS FLAAWRADEL RWEAFDDDHE MRRHIGGAAL
MGLGGILTGG CTIGQGITAG SLLAISWPIA IGGMMLGARM GIAVLVDGSP ADLIRRRWGS
LRGRLQPRKP ASIKASDNSS RLPATPSDAP RRTAPGSPAE
|
|---|
| |