Gene RPD_4254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4254 
Symbol 
ID4024775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4723533 
End bp4723862 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content60% 
IMG OID637964460 
Productputative sulfur oxidation protein SoxZ 
Protein accessionYP_571372 
Protein GI91978713 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.196263 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.227449 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATCA CTCCGACACC CCGCGTTCGC GTGCCGACCC AGGCCAAGCC CGGCGAACTC 
ATCGAGATCA AGACGCTGAT TTCGCACGAA ATGGAGTCCG GCCAGCGTAA GGACGCGTCG
GGCAAGATCG TGCCGCGCAG GATCATCAAC ACCTTCGTGG CCGAGTTCAA CGGCAAGATG
GTGTTTGAAG CCGAGTGGAA TCCGGCGATC TCGGCCAATC CATATCAGTC GTTCTTCTAC
AAGGCGGCCG AGTCCGGCGA GTTCACCTTC ACCTGGAAGG ACGACGACGG CTCCAACTAC
ACGTCCAAGC ACAAGCTGAC CGTCGGCTAA
 
Protein sequence
MAITPTPRVR VPTQAKPGEL IEIKTLISHE MESGQRKDAS GKIVPRRIIN TFVAEFNGKM 
VFEAEWNPAI SANPYQSFFY KAAESGEFTF TWKDDDGSNY TSKHKLTVG