| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4253 |
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| Symbol | |
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| ID | 4024774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4721690 |
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| End bp | 4723387 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637964459 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_571371 |
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| Protein GI | 91978712 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.417802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.174095 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTCGA GGCGGGAATT TCTGCAGGTG ACTGCGGCTG CGTCGGCGCT GACGCTCGCC
GGCGGCCTCG GTCCGGTTGG ACGCGTTGCG GCACAGCAGC GGCTGACGCA GGCCGACATC
CTGAAATTCG ATCCGCTGGG CACGGTGACG CTGCTACACA TCACCGACCT CCACGCCCAA
CTGATGCCGC TGCATTTCCG CGAGCCGTCG GTCAATCTCG GAGTCGGCGA GGTCAAGGGC
AAGCCGCCGC ATCTCACCGA CGCGGAATTC CGCAACTACT TCCACATCGC TACCGGCTCT
CCGGACGCTC TCGCGCTGAC CGCCGATGAT TTCGTCGCGC TCGCCCGCAA CTATGGCCGG
ATGGGCGGCA TGGACCGGAT CGCGACGCTG GTCGGCGCGA TCCGCGCGGA GCGCGGCGAC
GACAAGGTGC TGCTGCTCGA CGGCGGCGAC GCATGGCAGG GAAGCTGGAC TTCGCTGCAG
ACCAAGGGCC AGGACATGAT CGACGTCCTG AGCGCGCTCA AGATCGACGC GATGACCGGC
CATTGGGAGT TCACCTACGG CGCCGATCGC GTCAAGCAGG TCGCCGAACA GGCGTCATTC
GCCTTTCTCG CGCAGAACGT CCGCGACAAC GAATGGCAGG AACCGGTGTT CGAGGCGCGC
AAGATGTATG AGCGCGGCGG CGTGAAGGTC GCCGTGATCG GACAGGCGCT GCCGCGCACC
GCGATCGCCA ATCCACGCTG GATGTTCCCG AAATGGGAGT TCGGCATCCG CGAAGAGGAC
ATGCAGAAGC AGGTCGACGA CGCGCGCGCC GAAGGCGCCG AGGTCGTGGT TCTGCTGTCG
CACAATGGCT TCGACGTCGA CCGCAAGCTC GCCGGGCGCG TGAAGGGCCT CGACGTCATC
CTCACCGGTC ACACCCACGA CGCGATGCCG GGCCTGGTCA AGGTCGGCGA CACCGTTCTG
GTGGCGTCGG GCTCGCACGG CAAATTCGTG TCGCGGCTCG ATATCGCGGT GAAGGACAAG
AAGGTCTCCG ATATCCGCTT CAAGCTGATG CCGGTGTTCG CCGACGCCAT CAAGCCGGAT
CCGGCGATGG CGCAACTGGT CGAGAAGCTG CGTGCGCCTT TTGCCAAGGA TCTCGCCCGC
GTCGTCGGCA AGACCGACTC GCTGCTGTAT CGCCGCGGCA ATTTCAACGG CACGTTCGAC
GATCTGATCT GCGAAGCGAT GTTGAAGCAG CGCGACACCG AGATCGCCCT GTCGCCCGGT
TTCCGCTGGG GCGGAACGCT GCTGCCGAAC GATGACATCA CCTGGGAAGC GATCACCAAC
GCCACTGCGA TCACCTATCC GAACTGCTAC CGCACCGAGA TGACCGGCGA GCAGCTCAAG
ATCGTGCTCG AGGACATTGC CGACAACATC TTCCATCCCG ATCCCTATTT CCAGGGCGGC
GGCGACATGG TGCGCACCGG CGGCATGGGC TATGCGATCG ACGTCGGCAA GGAGATCGGC
TCGCGGATCT CCAACATGAC GCATCTCAAG ACCGGCAAGC CGATCGAGGC GTCGAAGAAA
TACACGGTCT CCGGCTGGGC CAGCATCAAC GAAAACACCG AGGGCCCGCC GATCTGGGAG
GTGCTGTCCA AGCACGTCGC GCAGGCCGGT CCGGTGAAGA TCGATCCCAG CAGCGCGGTC
AAGGTTTCAG GAGCCTGA
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| Protein sequence | MISRREFLQV TAAASALTLA GGLGPVGRVA AQQRLTQADI LKFDPLGTVT LLHITDLHAQ
LMPLHFREPS VNLGVGEVKG KPPHLTDAEF RNYFHIATGS PDALALTADD FVALARNYGR
MGGMDRIATL VGAIRAERGD DKVLLLDGGD AWQGSWTSLQ TKGQDMIDVL SALKIDAMTG
HWEFTYGADR VKQVAEQASF AFLAQNVRDN EWQEPVFEAR KMYERGGVKV AVIGQALPRT
AIANPRWMFP KWEFGIREED MQKQVDDARA EGAEVVVLLS HNGFDVDRKL AGRVKGLDVI
LTGHTHDAMP GLVKVGDTVL VASGSHGKFV SRLDIAVKDK KVSDIRFKLM PVFADAIKPD
PAMAQLVEKL RAPFAKDLAR VVGKTDSLLY RRGNFNGTFD DLICEAMLKQ RDTEIALSPG
FRWGGTLLPN DDITWEAITN ATAITYPNCY RTEMTGEQLK IVLEDIADNI FHPDPYFQGG
GDMVRTGGMG YAIDVGKEIG SRISNMTHLK TGKPIEASKK YTVSGWASIN ENTEGPPIWE
VLSKHVAQAG PVKIDPSSAV KVSGA
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