| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4252 |
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| Symbol | |
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| ID | 4024773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4720356 |
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| End bp | 4721633 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637964458 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_571370 |
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| Protein GI | 91978711 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2041] Sulfite oxidase and related enzymes |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.82541 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.253409 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAGA AGCCTCCCTC CGACATCCTC GATCGCCGCC GGTTTCTCGG CGCAGCAGGC
CTTGCGGGCG CCGGCGCATT GCTGCCCCTC GCGGCGAAGG CGGGCGAGGC GGCGAAGCCG
GACCCGGCGA TCACCGAGGT GCAGGACTGG AATCGCTATC TCGGCGACGG CGTCGACAAG
AAGCCCTATG GCGTTCCGTC CAAGTTCGAA AAGGATGTGA TCCGCCGCGA CGTGTCGTGG
CTCACCGCCT CGCCGGAATC CTCGGTCAAT TTCACGCCGC TGCATGCGAT CGACGGCATC
ATCACGCCGT CCGGCGTGTG TTTCGAGCGC CACCACGGCG GCGTCGCCGA GATCAACCCG
GCGGAGCACC GGCTGATGAT CAATGGCCTG GTCGACACCC CGATGGTGTT CACCATGGAC
GACATCAAGC GGATGCCGCG GGTCAACAAG GTGTACTTCC TGGAATGCGC GGCGAACTCC
GGCATGGAGT GGCGCGGCGC GCAGCTCAAC GGCTGCCAGT TCACCCACGG CATGATCCAC
AACGTGATGT ACACCGGCGT GCCCCTGAAG GTGCTGCTCG AACAGGCCGG GCTGAAGCCG
AACGCGAAAT GGCTGATGCT GGAGGGCGCG GACAGCGCCG GCATGAATCG CTCGCTGCCG
GTTGCGAAGG CGCTCGACGA CGTGCTGATC GCGTTCGCGA TGAATGGCGA GGCGCTGCGC
CCCGAGAACG GCTATCCGCT GCGCGCGGTG ATCCCCGGCT GGCAGGGTAA TCTCTGGGTG
AAATGGCTGC GCCGGATCGA AGCCGGCGAC CAGCCCTGGC AGGCCCGCGA GGAAACCTCG
AAATACACCG ATCTGATGCC CGACGGCCGC GCCCGCAAAT ACACCTTCGT GATGGATGCG
AAGTCGGTGA TCACCAACCC GTCGCCGCAA GCGCCGCTGA AGTTCAAGGG CCGCAACGTG
CTGAGCGGCG TCGCCTGGTC GGGCCGCGGC ACCGTCAAGC GCGTCGACGT CACGATGGAC
GGCGGTCGGA ACTGGCGTGA GGCGCGGATC GACGGACCGG TGCTGGACAA GTCGTTGGTG
CGTTTCTACG TCGATTTCGA CTGGAACGGT CAGGAACTGA TGCTGCAGTC GCGCGCCATC
GACGAGACCG GCTACGTACA GCCGACCAAG GCCGAGCTGC GCAAGGTCCG CGGCGTCAAC
TCGATCTATC ACAACAACGG CATCCAGACT TGGCTCGTGC ATCCGGACGG AGTGACTGAA
AATGTCGAGA TCGCTTAG
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| Protein sequence | MSQKPPSDIL DRRRFLGAAG LAGAGALLPL AAKAGEAAKP DPAITEVQDW NRYLGDGVDK
KPYGVPSKFE KDVIRRDVSW LTASPESSVN FTPLHAIDGI ITPSGVCFER HHGGVAEINP
AEHRLMINGL VDTPMVFTMD DIKRMPRVNK VYFLECAANS GMEWRGAQLN GCQFTHGMIH
NVMYTGVPLK VLLEQAGLKP NAKWLMLEGA DSAGMNRSLP VAKALDDVLI AFAMNGEALR
PENGYPLRAV IPGWQGNLWV KWLRRIEAGD QPWQAREETS KYTDLMPDGR ARKYTFVMDA
KSVITNPSPQ APLKFKGRNV LSGVAWSGRG TVKRVDVTMD GGRNWREARI DGPVLDKSLV
RFYVDFDWNG QELMLQSRAI DETGYVQPTK AELRKVRGVN SIYHNNGIQT WLVHPDGVTE
NVEIA
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