| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4250 |
|---|
| Symbol | |
|---|
| ID | 4024771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 4718369 |
|---|
| End bp | 4719460 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637964456 |
|---|
| Product | protein of unknown function DUF395, YeeE/YedE |
|---|
| Protein accession | YP_571368 |
|---|
| Protein GI | 91978709 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.778498 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.233136 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCCATCG ATCAGGTCAT CGAACGCTTC GGCGAAATCT ACGCGCTGAC CGCTGGCGGT
TTGCTGGTGG GCCTTGCGTT TGGAGCATGC GCCCAGCGGA GCAGGTTTTG TCTGCGTGCG
GCGGTGATCG AGTTTTCCGA AGCGTCGTTC GGCCCCAAGC TCGCGGTGTG GTTGTTGACG
TTCTCCGCGG CGGTGGCCGC GACGCAGGCG GCGATTTCCA CCGGCATCCT CGACGTCTCC
GAGGCACGGC AGCTCGCATC GACCGGCAGC CTGTCCGGCG CCGTCATCGG CGGCTTGATG
TTCGGCGCCG GCATGATCCT GTCGCGAGGC TGCGCCAGCC GCTTGCTGGT GTTGTCGGGA
ACCGGAAATC TGCGGGCGTT GGTCACCGGA CTGATCCTGA CGATCGTGGC GCAGGCGTCG
CTGCGCGGCG TGCTGTCGCC GGCGCGCGAG ACGCTCTCAC AATTGTGGAC GTTGCCGGGC
GGCGCTTCGC GCAATCTGCT GACTGTCGCC CATGTCGGGC CGCTCGCCGG CGCGTCGCTC
GGCGTGTTCG GGATCGGCGT GGCGTTGTGG CTGGCGTGGC GCAACCGCAT CGGCATCGTC
ACCGGGCTCG CAGCGCTCGG CGTCGGCCTC GCGGTCACTG CGGGCTGGCT GGTGACCTAC
ACGCTGTCGC TGCACGTGTT CGAGCCGACC ACGGTCAAGA GCGTGAGTTT CACCGGTCCG
TCGGCCGATA CGTTGATGGG CCTGATCAAT TCGCCGTCGG TTCCGCTCGG CTTCGATATC
GGGCTTGTGC CGGGCGTGTT CGCGGGCTCG TTGATCGCCG CGGTGATCGG TCGGGAATGG
AAGCTTCAGG GCTTCCATGA TGGGCTTAGC ATGGGGCGCT ACGCGGCCGG CGCTTTCCTG
ATGGGTTTCG GCGGGATGCT GGCGGGAGGC TGCGCTGTCG GCGCCGGCGT GACTGGCGGC
TCGATTTTCG CGGTGACGGC CTGGCTCGCC CTGGCGACGA TGTGGCTCGG CGCCCTGGCC
ACACATACTC TGATTGATGC GAAAGCTGCG GCGCCTGCGC CTGCGCTGTC GCCAAAACAG
ACCGGCAACT AA
|
|---|
| Protein sequence | MSIDQVIERF GEIYALTAGG LLVGLAFGAC AQRSRFCLRA AVIEFSEASF GPKLAVWLLT
FSAAVAATQA AISTGILDVS EARQLASTGS LSGAVIGGLM FGAGMILSRG CASRLLVLSG
TGNLRALVTG LILTIVAQAS LRGVLSPARE TLSQLWTLPG GASRNLLTVA HVGPLAGASL
GVFGIGVALW LAWRNRIGIV TGLAALGVGL AVTAGWLVTY TLSLHVFEPT TVKSVSFTGP
SADTLMGLIN SPSVPLGFDI GLVPGVFAGS LIAAVIGREW KLQGFHDGLS MGRYAAGAFL
MGFGGMLAGG CAVGAGVTGG SIFAVTAWLA LATMWLGALA THTLIDAKAA APAPALSPKQ
TGN
|
|---|
| |