Gene RPD_4241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4241 
Symbol 
ID4024762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4709400 
End bp4709933 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content60% 
IMG OID637964447 
Producthypothetical protein 
Protein accessionYP_571359 
Protein GI91978700 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG4088] Predicted nucleotide kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.572798 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGAC CGGAAGAGAT CGTGATCCTG ACAGGGACAC CTGGTTCAGG CAAAACGACC 
GCCGCGAACA GCATCACGCA ACTGCCGGGC TGCCCGAAGG TCCACCTGCA TTCGGACGAT
TTCTGGCACT TCATCAAAGC TGGCTCGATT CCACCGTGGC AGCCCGAAGC CCACGGCCAG
AATGCGACCG TGATCGACGT CTTGGTCGGA GCTGCGGCCG GCTATGCCAA GGGCGGCTAC
TTCGTCCTGG TCGACGGCAT CATTGGCCCC TGGTTTCTGG ACGGGTTCCG ACAACTCGAA
GCTGCGCCGC ATTACATCGT GCTCCGTCCG GATCTTGACG AGGCGATCCG ACGATGTCGC
GAACGAGGCG GTGACACACT TTCGGATCCC GCCCCAATTT CTGCGCTGTA TCAGCAGTTC
GGGAATTTGG GCGCTTTTGA AGGCCATGCG CTGTCGGTTG CAGGTCTCGG CGTCGACGAA
ACCTGCAATG CAATCGGTAA GGCGGTCGAG AGCGGGCGCT TCCGGCTGAA ATAG
 
Protein sequence
MFRPEEIVIL TGTPGSGKTT AANSITQLPG CPKVHLHSDD FWHFIKAGSI PPWQPEAHGQ 
NATVIDVLVG AAAGYAKGGY FVLVDGIIGP WFLDGFRQLE AAPHYIVLRP DLDEAIRRCR
ERGGDTLSDP APISALYQQF GNLGAFEGHA LSVAGLGVDE TCNAIGKAVE SGRFRLK