| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4227 |
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| Symbol | |
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| ID | 4024748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4694026 |
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| End bp | 4695303 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637964433 |
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| Product | major facilitator transporter |
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| Protein accession | YP_571345 |
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| Protein GI | 91978686 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0992586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.574471 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCCCTGC AGCAGACGCC CGGCCAGCAA CGGTCGCTCG ACGCCCTGAA CTTCTTCCTG
GCCGACGTCC GCGACGGGCT CGGGCCCTAT CTGGCGATCT ATCTGCTGTC GGTTCAGCAC
TGGAATGAGG CCTCGATCGG ACTGGTGATG ACGGTTGCCG CGATGGCTGG GATCGCCGCT
CAGACGCCGG CCGGGGCGCT GATCGACCGC TCTACGGCCA AGCGCGGCCT GCTGATCGCC
GCCGCGATCG CGGTGACGCT GGCGTCAGTA ACGCTGCCGC TGTTGCAGAG CTTCGAAGCC
GTCGCGGCGA CCCAGGCACT TGCAGGCGCC GCCGGCGCGA TCTTCGCGCC CGCGGTCGCG
GCGGTGACAC TCGGGATCGT CGGGCCCCGC GCCTTCGCCC GCCGCACCGG GCGCAACGAG
GCGTTCAATC ACGCAGGCAA TGCGGTGGCG GCGACGCTGG CGGGGGTATC TGCCTATTTT
TTCGGTCCGG TGGTGGTGTT CTGGCTGATG TCGGCGATGG CCGTCGCCAG CATTTTCGCG
ACGCTGTCGA TCCCGGCGAA AGCGATCGAC GATCAGGTCG CGCGCGGTCT CGCCTCGATC
GGCGGACTGG ACGCAGGCCC GCAAGTTCCC GACCAGCGCC ACGACCAGCC CTCGGGTTTC
AAAGTGCTGA TCACCTGCCG TCCGCTGCTG ATCTTCGCGG CGGCGACCGT GCTGTTTCAC
TTCGCCAATG CCGCGATGCT GCCGCTGGTC GGGCAGAAGC TCACGCTGGT GAACAGGGAG
ATCGGCACCA CCCTGATGTC GGTGTGCATC GTCGCGGCGC AGATCGTGAT GGTGCCGGTG
GCGATGCTGG TCGGGCACAA GGCCGATGTC TGGGGCCGCA AGCCGATCTT TGCGGTGGCG
CTGGGCGTGC TGGCGCTGCG CGGCGCGCTG TATCCGTTGT CCGACAATCC GTTCTGGCTG
GTCGGGGTGC AGATGCTCGA CGGCGTCGGG GCCGGCATCT TCGGCGCGCT GTTTCCGCTG
GTGGTGGCCG ACCTCACCCG CGGCACCGGT CATTTCAATA TCAGCCAGGG CGCGATCGCC
ACCGCTACCG GGATCGGCGG CGCGCTGTCG ACCGGCGTCG CGGGGCTGAT CGTGGTCACG
GCCGGCTACA GCGCTGCATT CCTCACCCTC GCTGCGATCG CGGCGCTCGG GCTGGTGCTA
TTCGTCGTCC TGATGCCCGA GACCCGCCAG ACCGGGCTGC CTGCGATCGG ACTGGCCCCG
GGCATGCCGG CTGAGTAG
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| Protein sequence | MPLQQTPGQQ RSLDALNFFL ADVRDGLGPY LAIYLLSVQH WNEASIGLVM TVAAMAGIAA
QTPAGALIDR STAKRGLLIA AAIAVTLASV TLPLLQSFEA VAATQALAGA AGAIFAPAVA
AVTLGIVGPR AFARRTGRNE AFNHAGNAVA ATLAGVSAYF FGPVVVFWLM SAMAVASIFA
TLSIPAKAID DQVARGLASI GGLDAGPQVP DQRHDQPSGF KVLITCRPLL IFAAATVLFH
FANAAMLPLV GQKLTLVNRE IGTTLMSVCI VAAQIVMVPV AMLVGHKADV WGRKPIFAVA
LGVLALRGAL YPLSDNPFWL VGVQMLDGVG AGIFGALFPL VVADLTRGTG HFNISQGAIA
TATGIGGALS TGVAGLIVVT AGYSAAFLTL AAIAALGLVL FVVLMPETRQ TGLPAIGLAP
GMPAE
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