| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4223 |
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| Symbol | |
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| ID | 4024744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4689160 |
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| End bp | 4689963 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637964429 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_571341 |
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| Protein GI | 91978682 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.365556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.364318 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACGAC TGCAAGGCAA GACCGCATTG GTGGTCGGCG CCGGCTCGAT CGGACCGGGC
TGGGGCAATG GCAAGGCGAC CGCGGTGACC TTTGCGCGCG AGGGCGCGCA GGTGTTCTGC
GTCGACCGCA ACGCCGAAGC GGCGGAGGAA ACCGCCAGCC TGATCACCGG CACCGGCGGC
CGCGCCGCGG CTTTCGCCGC CGATGCGTCG CGCGCCGTCG ACGTCGAGGC GATGGTCCAT
GCCTGTATGG CGGCTTACGG CCAGATCGAC GTGCTCGACA ACAATGTCGG CATCGCCGAA
ACCGGCGGCG TGGTCGAGAT TTCCGAGGCG GAGTGGGACC GGGTGTTCGC GGTCAATCTC
AAGAGCGCCT TTCTGGCGAT GAAGCATGTG ATCCCGATCA TGCAGCGCCA GGGCGGCGGC
TCGATCATCA ACATCTCGTC GATCGCTTCG ATCCGGCATC TCGGCATCTC GTATGTCAGC
TATGCGGCTT CGAAGGCGGC GATGAACGCA ATGACCCGTA CCACCGCGGT GGAGTATGCC
CGCGACCACA TCCGGGTGAA TTGCATCCTG CCCGGCCTGA TGAAAACGCC GATGGTCGCG
CATTCCGCGG GCCTCGCTGC GAGCTACGCC GGCGGCGACG TCGAGGCGAT GTGGCGCGCG
CGCGACGAGC AGGTGCCGAT GGGGCACATG GGTGAAGCCT GGGACGTCGC CAACGCCGCG
CTGTTTCTCG CCGGCGACGA GTCGAAATAC GTCACCGGCC TCGAACTGGT GGTCGACGGC
GGCCTGACCC TCAAGGTGAA TTGA
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| Protein sequence | MPRLQGKTAL VVGAGSIGPG WGNGKATAVT FAREGAQVFC VDRNAEAAEE TASLITGTGG
RAAAFAADAS RAVDVEAMVH ACMAAYGQID VLDNNVGIAE TGGVVEISEA EWDRVFAVNL
KSAFLAMKHV IPIMQRQGGG SIINISSIAS IRHLGISYVS YAASKAAMNA MTRTTAVEYA
RDHIRVNCIL PGLMKTPMVA HSAGLAASYA GGDVEAMWRA RDEQVPMGHM GEAWDVANAA
LFLAGDESKY VTGLELVVDG GLTLKVN
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