Gene RPD_4192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4192 
Symbol 
ID4024713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4659232 
End bp4660497 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content66% 
IMG OID637964398 
Productferric reductase-like transmembrane component-like 
Protein accessionYP_571310 
Protein GI91978651 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4097] Predicted ferric reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.611653 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.631295 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGCAT ACGGAGCAGG CTTTCGTGTC TGGTCGGTTC CGCTGCTCAC GATTGCGGTG 
CCGCTTGGCT TTGTGGTGTG GGCATTTCCC CATGGGCTCG CGCCGTTGCG GGCCGCAGGC
ATCGTTACCG GCTGGTTGGG TTGTGGCCTG CTGCTGGTGA GCCTGCTGCT GATGCTGCGC
GAGCCGCGGC TCGCGAATTG GCTCGGTGGC CTCGAGCGAA TGTATCGCTG GCATCACGTC
ACCGGTGTTG CGGCCTATGT TTTTCTGCTG CTGCATCCGC TGGCGCTCGC TGCAGGCAAC
TGGCAGACGT CGCGGGTTCT CGCCTGGCAC ACGCTGTCGC CGGTCGAGGA AAGTTGGCCG
GTGTGGTCGG GCTGGCTCGG CCTGCTGTTG CTGATGATCG GCCTCGCCGC CACTTTCACC
CCCTCGATCC GCTACGGCGC ATGGCGCTGG CTGCACGCCC TGCTCGGCAT CGGCGTCGTG
ATCGGCCTCG TGCATCTGAT CCTGCTCGGC ATCGACGAGC CGGTGCTGCC GATCCTGGCG
ATCGCGGCGG CTATCCTGGG CTGGCGGCTT CTGCGCGGCG ATCTCGGTCT CGGGGCGCGG
CCCTATATCG TCGCGACGGC GCGCAAGCTG ACCGCGCGTT CCGTCGAGAT CGTGCTGCGG
CCGCTCGCCG ATCCCGTCAC ATTGAGCACC GGGCAGTTCG TGCTGGTGGC GTTCAGGAAT
GGTCCGGTCT ATCGCGGCTG CGGCGAATTC CATCCCTTCA CCATCAGTTC GATCGACGGC
GACGGTGCGC TGCATCTCGC GGTGAAGGCG CTCGGCGATT GCACCTCGCG GATGCTGTCG
ATCGAGCCTG GCGTTGCGGC GCGCGTGATC GGCGGCTTCG GCAGCTTCCT CAGCGAGGTG
AGCGGCGCGC CGCAATTGTG GATCGCGGGC GGCATCGGCG TCACCCCGTT CGTCGCGTTG
CTGAACGACG GCAGGCTGCG CCATCCGGCG CGGCTGCTGT ATCTCTACCG CCGCGAGGAT
GACGCGACCT ATCTGCGGGA AATGCGTCAG ATCGCTGCGA CCGACCCGAA CCTGACGCTG
CAAACCATCG TGACGGGCGA CGAACTCCCT GACATCGAAG GTTTACTCCC CGATGCCCGC
GAATTGTCAG GCGTCGAATG CTATCTGTGT GGGCCGCCGG GTCTGGTCGG CGCGCTGAAG
CAGGTGTTGA GCGCGCGCGG CGTTGCCGCG CAGCATATTC ACTTCGAGAA CTTCGAGTTC
AGATGA
 
Protein sequence
MAAYGAGFRV WSVPLLTIAV PLGFVVWAFP HGLAPLRAAG IVTGWLGCGL LLVSLLLMLR 
EPRLANWLGG LERMYRWHHV TGVAAYVFLL LHPLALAAGN WQTSRVLAWH TLSPVEESWP
VWSGWLGLLL LMIGLAATFT PSIRYGAWRW LHALLGIGVV IGLVHLILLG IDEPVLPILA
IAAAILGWRL LRGDLGLGAR PYIVATARKL TARSVEIVLR PLADPVTLST GQFVLVAFRN
GPVYRGCGEF HPFTISSIDG DGALHLAVKA LGDCTSRMLS IEPGVAARVI GGFGSFLSEV
SGAPQLWIAG GIGVTPFVAL LNDGRLRHPA RLLYLYRRED DATYLREMRQ IAATDPNLTL
QTIVTGDELP DIEGLLPDAR ELSGVECYLC GPPGLVGALK QVLSARGVAA QHIHFENFEF
R