Gene RPD_4182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4182 
Symbol 
ID4024703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4650983 
End bp4651318 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content60% 
IMG OID637964388 
Producttranscriptional regulator 
Protein accessionYP_571300 
Protein GI91978641 
COG category[K] Transcription 
COG ID[COG2944] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.768312 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATCA AGAAGAAGAT TAGTCCGTTG GCGAAGGCGC TGCTGGAGAC GGCGGACGAC 
ATGCGCAAGT CCGGGCTGAT GGACAAGCCC AGCCATGACA AGATCACCTT GCGCCATCTC
GGCGACGCCC GAATCCCGAC GTTTGGGCCA ATCACCGGGG CGCAGATCAG ATCAATCCGC
GAGCGTGCGA ATCTCAGTCA GGCGGTCTTC GCGCGCTATC TCAATCTGAC AGTGGGCTAT
GTCTCGCAAC TCGAACGCGG AACCAAACAG CCGACCGGCG CAGCGCTGGC CTTGCTCGAT
GTCATCAAGC GCAAAGGGAT CGACGCTATC CTTTGA
 
Protein sequence
MAIKKKISPL AKALLETADD MRKSGLMDKP SHDKITLRHL GDARIPTFGP ITGAQIRSIR 
ERANLSQAVF ARYLNLTVGY VSQLERGTKQ PTGAALALLD VIKRKGIDAI L