Gene RPD_4179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4179 
Symbol 
ID4024700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4648581 
End bp4649405 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content67% 
IMG OID637964385 
Producthypothetical protein 
Protein accessionYP_571297 
Protein GI91978638 
COG category[S] Function unknown 
COG ID[COG1692] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00282] metallophosphoesterase, MG_246/BB_0505 family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.14857 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCATTC TGTTCATCGG CGACGTGGTC GGCAAATCCG GCCGAACCGC GATCACCGAC 
CATCTGCCCG CGGCGATCCG CGACTGGCAG GTCGACTGCA CCATCATCAA TGGCGAGAAC
GCCGCCGGAG GCTTCGGCAT CACCGAGGCG ATCTACCATG ATTTCATCGA CGCCGGCGCC
GATGCGGTGA CGCTCGGCAA CCACGCCTGG AATCAGAAGG AAGCGCTGGT GTTCATCGAG
CGCGCGCCGC GCCTGATCCG GCCGGCGAAT TTCCCGCGCC ACACGCCGGG CCGCGGCGCC
GCTTTGGTCG AAACCCGCAA GGGCGCGCGG GTGCTGGTGA TCAACGCGAT GGGCCGCGTC
TTCATGGAAC CGCTGAACGA TCCGTTCGCC GCGGTCGCGC GCGAACTCGA CGCCTGCCCG
CTGCGCGAAG CCGCCGACGC CGTCGTGCTG GATTTTCACG GCGAGGCGTC GAGCGAGAAG
CAGGGCATGG GTTATTTCTG CGACGGCAAG GTCAGCCTGG TGGTCGGCAC CCATACCCAT
GTGCCCACCG CCGATCATCA AATCCTGCCC GGCGGCACCG CCTACATGAC CGACGCCGGC
ATGACCGGCG ACTATGATTC GGTGATCGGT ATGCACAAGG ACGAGCCGCT GCAGCGCTTC
ACCACCGGCA TCGCCTCGAG CCGTTTCGAG CCGGCCAATG GGGTCGCCAC TTTGAGCGGC
GTCGCGGTCG AGACCGACGA CAGCACCGGC CTCGCGATCC GGATCGCCCC GGTGCGGATC
GGCGGACGGC TGGAGCCGGC GGTGCCGGCG TTCTGGGTGA GTTAG
 
Protein sequence
MRILFIGDVV GKSGRTAITD HLPAAIRDWQ VDCTIINGEN AAGGFGITEA IYHDFIDAGA 
DAVTLGNHAW NQKEALVFIE RAPRLIRPAN FPRHTPGRGA ALVETRKGAR VLVINAMGRV
FMEPLNDPFA AVARELDACP LREAADAVVL DFHGEASSEK QGMGYFCDGK VSLVVGTHTH
VPTADHQILP GGTAYMTDAG MTGDYDSVIG MHKDEPLQRF TTGIASSRFE PANGVATLSG
VAVETDDSTG LAIRIAPVRI GGRLEPAVPA FWVS