Gene RPD_4165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4165 
Symbol 
ID4024687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4633413 
End bp4633874 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content64% 
IMG OID637964373 
Product4-hydroxybenzoyl-CoA thioesterase 
Protein accessionYP_571285 
Protein GI91978626 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.161353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCACT CCGCTCCCCA CAGCACCCTC GACGGCGCGA TCCGCGACGG CATTCACCAC 
ATGCAGGTCC GGGTCTATTA CGAGGACACG GATTTTTCCG GGATCGTCTA TCACGCCAAC
TATCTGCGCT TCATGGAGCG CGGCCGGACC AATTATCTGC GGCTGCTCGG CGCGGCGCAG
AGCGCGTTGT TCGCCGAGGC CGAAAGCGAG ACCCCGGGCT TCGCCTTCGT GGTGCGGGCG
ATGCAGCTCG ATTTCCTCAA GCCGGCGAAG ATGGACGATC TGCTCGACGT GATCACCCGC
CCCGTAGAAG TACGCGGCGC GTCGATCACC ATGCATCAGC AGATCAAGCA CGGCGACGTT
CTGCTGATGG CAGCGAGCGT CAAGGTCGCC TTTGTCTCCG GCGGGCGCGC CCGCCCGATC
CCGCTACCAC TGCGGGTCGC GATGAAGGCC GATGTCGCTT GA
 
Protein sequence
MPHSAPHSTL DGAIRDGIHH MQVRVYYEDT DFSGIVYHAN YLRFMERGRT NYLRLLGAAQ 
SALFAEAESE TPGFAFVVRA MQLDFLKPAK MDDLLDVITR PVEVRGASIT MHQQIKHGDV
LLMAASVKVA FVSGGRARPI PLPLRVAMKA DVA