Gene RPD_4161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4161 
Symbol 
ID4024683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4629193 
End bp4629564 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content66% 
IMG OID637964369 
Producthypothetical protein 
Protein accessionYP_571281 
Protein GI91978622 
COG category[S] Function unknown 
COG ID[COG3795] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.78704 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTACG CCATCCTTTG CTATCATGAC GAGGATTTCG TCGGTTCGTG GAGCCGCGAG 
GAAGACGCCG CGGTGATGGA GAAGCTCAAG CTCGTCCACG GCAAGCTCGC CGAGCAAGGT
CGGCTCGGGC CGGTGGCGCG GCTGCTGCCG ACCACGGCGG CGACCACGTT GCGCAAGGAT
TCCGAGCCGC CGGTGGTGAT CGACGGGCCG TTCGCCGAGA CCAAGGAACA GTTGCTCGGT
TTCTACGTCG TCGAATGCGC CGATCTCGAC GGCGCGCTCG AGGTCGCACG CGACCTCGGC
CGCGCCAATC CGGGCGGGTC CTACGAGATC CGCCCGATCG GCCTGTTCAT GCCGGGGACA
CTGCAGCCAT GA
 
Protein sequence
MLYAILCYHD EDFVGSWSRE EDAAVMEKLK LVHGKLAEQG RLGPVARLLP TTAATTLRKD 
SEPPVVIDGP FAETKEQLLG FYVVECADLD GALEVARDLG RANPGGSYEI RPIGLFMPGT
LQP