| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4144 |
|---|
| Symbol | |
|---|
| ID | 4024666 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 4614305 |
|---|
| End bp | 4614802 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637964352 |
|---|
| Product | OmpA/MotB |
|---|
| Protein accession | YP_571264 |
|---|
| Protein GI | 91978605 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACATC AGAAGCGAAT CCTCCAGGGA TTGAAGCTGG CCGCGGTGCT CGCGGTGGCC
CTGTCGATGG GGGCTTGCGC CAACAACAAG ACGGGTCTCG GCGCCGATGG AGCAATGGCC
AGCGCGGCGA CTCCCGGCAG CCAGCAGGAT TTCGTCGTCA ACGTCGGCGA CCGCGTGTTC
TTCGAGAGCG ACCAGACCGA ATTGTCGCCG CAGGCGGCGG CGACTCTCGA CAAGCAGGCA
CAGTGGCTGC AGACCTACAA TCGCTACTCC TTCACCATCG AGGGACATGC CGACGAGCGC
GGCACCCGCG AATACAACAT CGCGCTGGGC GCTCGCCGGG CACAGTCGGT CCGCAACTAT
CTCTCCTCGC GCGGCATCGA GCCGTCCCGG ATGCGGACGA TTTCCTACGG CAAGGAGCGC
CCGGTCGCGG TCTGCAACGA CATCTCGTGC TGGTCGCAGA ACCGCCGCGC GGTGACGGTG
CTGAACGCCG GCGCCTGA
|
|---|
| Protein sequence | MTHQKRILQG LKLAAVLAVA LSMGACANNK TGLGADGAMA SAATPGSQQD FVVNVGDRVF
FESDQTELSP QAAATLDKQA QWLQTYNRYS FTIEGHADER GTREYNIALG ARRAQSVRNY
LSSRGIEPSR MRTISYGKER PVAVCNDISC WSQNRRAVTV LNAGA
|
|---|
| |