| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4141 |
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| Symbol | |
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| ID | 4024663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4609730 |
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| End bp | 4611646 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637964349 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_571261 |
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| Protein GI | 91978602 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCA ATTTGCGGAA TTTCGCCCTC TGGGTCATTA TCGTCTTGCT GCTTTTGGCG
CTGTTTACAC TCTTCCAGAA TCCCGGCCAG CGCGCCGCTT CGCAGGACAT TTCGTTCTCG
CAGTTGTTGA GCGATGTCGA TCAGAATCGC GTTCGCGACG TGGTGATCCA GGGCCAGGAA
ATTCACGGCA CCTTCACCAA CGGCTCGACC TTCCAGACCT ACGCGCCGAA CGATCCGTCG
CTGGTCACGC GCCTGTACAA CGGCAAGGTT GCGATCACCG CGAAGCCGCC GGGCGACAAC
GTGCCGTGGT TCGTTTCGCT GCTCGTCTCC TGGCTGCCAT TCATCGCGCT GATCGGCGTC
TGGATTTTCC TGTCGCGGCA GATGCAGGGC GGCGCCGGCA AGGCGATGGG CTTTGGCAAG
TCGCGCGCCA AGATGCTGAC CGAGGCGCAT GGCCGCGTCA CCTTCGAGGA CGTCGCCGGC
GTCGACGAGG CCAAGCAGGA CCTGCAGGAG ATCGTCGAGT TCCTGCGCGA CCCGGGCAAG
TTCCAGCGCC TCGGCGGCCG CATTCCGCGC GGCGTGCTGC TGGTCGGCCC GCCCGGCACC
GGTAAGACGC TGATCGCCCG CGCCGTGGCC GGCGAAGCCA ATGTGCCGTT CTTCACGATT
TCGGGTTCGG ACTTCGTCGA AATGTTCGTC GGCGTCGGCG CCAGCCGCGT CCGCGACATG
TTCGAGCAGG CCAAGAAGAA CGCGCCGTGC ATCATCTTCA TCGACGAAAT CGACGCGGTC
GGCCGTCATC GTGGCGCCGG TCTTGGCGGC GGTAACGACG AGCGCGAGCA GACCCTCAAC
CAGCTGCTGG TCGAGATGGA CGGCTTCGAG GCCAATGAGG GCGTGATCCT GATCGCCGCC
ACCAACCGGC CCGACGTGCT CGATCCGGCG CTGCTGCGTC CCGGCCGCTT CGACCGCCAG
GTGGTGGTGC CGAATCCGGA CGTGGTCGGC CGCGAGCAGA TCCTCAAGGT CCATGTCCGC
AAGGTGCCGC TGGCGCCGGA TATCAATCTG AAGACCATCG CGCGCGGCAC GCCCGGCTTC
TCGGGCGCCG ACCTGATGAA CCTCGTCAAC GAGGCGGCGC TGATGGCGGC CCGGCGCAAC
AAGCGCATGG TCACCCAGGC CGAGTTCGAA GACGCCAAGG ACAAGGTGAT GATGGGCGCC
GAGCGCAAGT CGCTGGTGAT GACGGAGGAG GAGAAGCTCC TCACCGCCTA TCACGAAGGC
GGCCACGCCA TCGTCGGCCT GAACGTCGTC GCCACCGATC CGATCCACAA GGCGACCATC
ATTCCGCGCG GCCGAGCGCT CGGCATGGTG ATGCAGCTGC CCGAGCGCGA CAAGCTGTCG
ATGTCGCTCG AGCAGATGAC CTCGCGCCTC GCGATCATGA TGGGCGGCCG CGTCGCCGAA
GAGATGATCT TCGGTCGCCA GAAGGTGACC TCGGGCGCGT CGTCCGACAT CGAGCAGGCC
ACCCGCCTGG CCCGGATGAT GGTGACCCGC TGGGGCCTTT CGGAGGAACT CGGCACGGTG
TCGTATGGCG AGAACCAGGA CGAGGTGTTC CTCGGGATGT CGGTCTCGCG CACCCAGAAC
GCCTCCGAGG CGACGGTCCA GAAGATCGAC GCCGAGATCA AGCGGCTGGT TCAGGAGGGT
TACGACGAGG CCGAGCGCAT CCTCACCGAA AAGCGCGCCG ACCTCGAAGC GCTCGCCAAG
GGCCTGCTGG AGTTCGAGAC GCTGACCGGC GACGAGATCA CCGATCTCAT CAACGGCAAG
AAGCCGAACC GCGAATCGGT GCTGGAGCCG TCTGGCCCGC GCACCTCGGC TGTCCCGCCG
GCCGGCAAGC CGCGGCCGCG GCCCGATCCC GGCCTGGAGC CGCAGCCGCA GGCCTGA
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| Protein sequence | MNANLRNFAL WVIIVLLLLA LFTLFQNPGQ RAASQDISFS QLLSDVDQNR VRDVVIQGQE
IHGTFTNGST FQTYAPNDPS LVTRLYNGKV AITAKPPGDN VPWFVSLLVS WLPFIALIGV
WIFLSRQMQG GAGKAMGFGK SRAKMLTEAH GRVTFEDVAG VDEAKQDLQE IVEFLRDPGK
FQRLGGRIPR GVLLVGPPGT GKTLIARAVA GEANVPFFTI SGSDFVEMFV GVGASRVRDM
FEQAKKNAPC IIFIDEIDAV GRHRGAGLGG GNDEREQTLN QLLVEMDGFE ANEGVILIAA
TNRPDVLDPA LLRPGRFDRQ VVVPNPDVVG REQILKVHVR KVPLAPDINL KTIARGTPGF
SGADLMNLVN EAALMAARRN KRMVTQAEFE DAKDKVMMGA ERKSLVMTEE EKLLTAYHEG
GHAIVGLNVV ATDPIHKATI IPRGRALGMV MQLPERDKLS MSLEQMTSRL AIMMGGRVAE
EMIFGRQKVT SGASSDIEQA TRLARMMVTR WGLSEELGTV SYGENQDEVF LGMSVSRTQN
ASEATVQKID AEIKRLVQEG YDEAERILTE KRADLEALAK GLLEFETLTG DEITDLINGK
KPNRESVLEP SGPRTSAVPP AGKPRPRPDP GLEPQPQA
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