Gene RPD_4140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4140 
Symbol 
ID4024662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4608737 
End bp4609474 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content67% 
IMG OID637964348 
ProductAzlC-like 
Protein accessionYP_571260 
Protein GI91978601 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACTC ACATTCCCAA AGCCCCGGCC TTTTGGTCGC GCGAGGCGAT TTGGCCCGGC 
GTCATCGCGA TCGGCCCGCT GCTGCCGGGC ACGCTCGCCT TCGGCATGGC GTTCGGTGCG
CTGTGCGCGC AGAAGAATTT CACGCTGGCC GAAGTCGAAG TGATGATGGC GACGGTCTAT
GGCGGGCTGT CGCAATACGT CGCCGTACAG TCCTGGCCGG CGACGCTGAC GCCGTCGACG
ATCGCGACGC TGGCGCTGCT GACGACGACA GTGAACATCC GGTTCTTTCT GATGACCGCC
TCGATGCGGC CCTGGTTCGG AACGCTGCCG GCCTGGCAGG CCTATCCGGC GATGCTGCTG
GTGACCGATG GCGGCTGGCT CGCGGCGATG CGCTATCGCG AGCATGGCGG CGCCAATGCC
TGGTTCTACG TTGCCGGCGG CATCGTGCTG TATCTTGTCT GGCTGGTGTC CGCGATCCCG
GGCTATCTGC TCGCCGAGCA ATTATCCGAT CCGAAGAAGT TCGGCGTCGA TCTCGCGATG
CCGGCGTTCT TCGCCGCGAT GCTGGTGCCG GCCTGGAAAG GGCCGCGGCG CGCGATTCCG
TGGGTGGTGT CGGGTGTGGT CGCGCTCACC GTGCACTGGC TGACGCCGGG CTACTGGTTC
ATCATCGCCG GTGCGATCTC CGGCGCATTG AGCGCCGGGT TGATGGACGA GCCCCCGCCG
CCGGAGCGCG CCGCATGA
 
Protein sequence
MTTHIPKAPA FWSREAIWPG VIAIGPLLPG TLAFGMAFGA LCAQKNFTLA EVEVMMATVY 
GGLSQYVAVQ SWPATLTPST IATLALLTTT VNIRFFLMTA SMRPWFGTLP AWQAYPAMLL
VTDGGWLAAM RYREHGGANA WFYVAGGIVL YLVWLVSAIP GYLLAEQLSD PKKFGVDLAM
PAFFAAMLVP AWKGPRRAIP WVVSGVVALT VHWLTPGYWF IIAGAISGAL SAGLMDEPPP
PERAA