| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4138 |
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| Symbol | |
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| ID | 4024660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4607454 |
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| End bp | 4608128 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637964346 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_571258 |
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| Protein GI | 91978599 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTTACC GGCGGACCCA TCAGGTCGTG AAGCGACTGG CTGCGCGGCG CAGCGCCATC
CTGGCCGCGG CGCGCGAGGC CGCGGCGGAA GGCGGCATGG CGGCGGTGCA GATCGCCCCG
GTGGCGAACC GGGCCAACGT CGCCGCCGGA ACAGTTTACC GCTACTTCCC GTCAAAGGCC
GATCTCATCT CCGAACTGAT CGCGGACGTG TCGCGCGACG AACTGGCTGC AATCCGCCGC
GCCGCCGATG CTGCGCCCGG TCCGTCCTCG GCGCTGGCCG CTGCGGTGAC CACGGTCGCG
GTCCATGTGC TGTCGCACCG CAAGCTGGCA TGGGGAATTC TCGCGGAACC AGTCGATGTC
GATGTCTCGG CCTCGCGGCT CGCCAGCCGT CGAGAGATCG CCAACGAGGT CGAATCGCGG
ATCGTCGCTG CGGTGCAGGC CGGGCATCTG CCTGCACAGG ACACGGCGCT GGCGGCGACC
GCGCTGCTTG GCGCGGTCCA TGAATCGCTG GTCGGCCCGC TGGCGCCCGA CAATCTCGAC
GACCCGGTGA AGTTGCGCGA TGCGGTGCAG ACTGTGACAC TGCTGGCGCT GCGGGCGGTC
GGCGTGATGG ATGCGCGCGC ACGCGGGCTT GTGGTACAGG CGGTGGTGCC GTCACGTAGT
CTGGTCGGGG CCTGA
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| Protein sequence | MVYRRTHQVV KRLAARRSAI LAAAREAAAE GGMAAVQIAP VANRANVAAG TVYRYFPSKA
DLISELIADV SRDELAAIRR AADAAPGPSS ALAAAVTTVA VHVLSHRKLA WGILAEPVDV
DVSASRLASR REIANEVESR IVAAVQAGHL PAQDTALAAT ALLGAVHESL VGPLAPDNLD
DPVKLRDAVQ TVTLLALRAV GVMDARARGL VVQAVVPSRS LVGA
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