| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4129 |
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| Symbol | |
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| ID | 4024651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4594602 |
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| End bp | 4596116 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637964337 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_571249 |
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| Protein GI | 91978590 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.60213 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGTCT ATGACGTAGT GGTGATCGGC GCCGGCCTCG GCGGCCTGAC CGCAGGCGCG
ATCCTCGCCC GCGCGGGCCG CAAAGTCCTG GTCATCGAGC GTGGCAATTC AGTCGGCGGA
GCGGCGTCGA GCTACAAGGT CGGCGATCTG TTCGTCGAGG GTTCGCTGCA TGTCACCGGC
GATCCGCATC ATCCGCGCGA CCCCAAGCAC TCGGCGCTGA TCCGCGCCGG CGCGGGCGAT
GCGGTGCAAT GGATTCCCGC CGGCGCGCTT TACGAAATGC GCGGCGGCCC GCTCTCACAG
CCGTTCGTCC TGCCCGATGA TTTCGCCGGC GCGCGCGATG CGCTCACGGC GCGGTTTCCC
GACGCCCGCA GCGGCATCGC GCAGTTCCTC GGCGAGATGG AACGGCTGGC GGCGGCGGTC
GGCGACGGCG GCCTCGAGGC CGTGTTCGCG CTCGCGCCGG AGTTTCCCGA CTGGTCGTCA
ACGCTCGCCG ACAAGCTGCA GGCGCTGTTC GGCGACAATG AAGCGGTGAA ATGCGCGATC
GCCGGCAACC TCTCCTACTT TCATGATGAT CCCGCCACGC TGTGGTGGGT GCCGTTCGCA
ATGATGCAGG GCAGTTTCCT GCTGACCGGC GCCCGCTTCG TGCAGGGCGG ATCGCAGCGG
CTGTCGAGCG GGCTCGCGCG CGCCGTTCGC GTCGGTGGCG GCGAGGTGGT GCTGCGCCGT
GTCGTCAGCG GCGTCGAGAT CGGTGAAGCA GGCCATGCCC ATCGCATCAC CCACACCGCG
CGCGACGGCA GCGATCCGCA AACGGTCGAA GCGCTGACCG TGGTGGGCAA CGCCGCGCCG
GGCGCCCTCG CGGCGCTGAT GCCCGATGCG CAAGGCGAGC GCCTGACCCG GAGCTATGCC
GGCCGTACGC CGTCGCTGTC GCTGTTCGCC TTGACGCTCG GGCTGTCGAC GCCGCCGCGC
GCGTTCGGCT TCACCAGCTA CGCGACACAG TTGCTGCCGG ACTGGATGAC GACGCTTGCA
TCCTACGCCG AGGGGAAGGC GCTGATGGCC GGCGAGCCGA CCGGGCGGAT GCCGCCGCTG
GCGATCGCCG ACTACGCGGC GATCGATTCC GGCGTCCCGT CGCCGCCTTA TGTCCTGTCG
GTGGTGGGGC CGGATCAGAC CTCGAACTGG AGCGGGCTTA CGCAGGACGA CTACCGGGCG
AAGCGGAGCC GCTGGCAGCA GGCGATCATT GATCAGCTCG ACCGTAACTA TCCGGGACTA
GCCGGCGCGG TGACCGCGGC GTCATTCAAT TCCGCGCAGT CGGTGCAGCA ATATCTCAAC
CTGCCGGAAG GCTCGGTCTA CGGCTTCGCG CCGCTGCCGC CTGACAACAC CGGCGCCCCC
TATCGCTCGC CGCGCACGGT GTTGCCGGGA CTGTATCTCG CCTCGGCCTA TGCGGGCGTC
GGCGGTTACA GCGGCGTGGT GCAATCGGCG GCATTGTGCG CCGACGCGAT CCTGCAGGAC
AATCCGAAAC GTTAG
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| Protein sequence | MTVYDVVVIG AGLGGLTAGA ILARAGRKVL VIERGNSVGG AASSYKVGDL FVEGSLHVTG
DPHHPRDPKH SALIRAGAGD AVQWIPAGAL YEMRGGPLSQ PFVLPDDFAG ARDALTARFP
DARSGIAQFL GEMERLAAAV GDGGLEAVFA LAPEFPDWSS TLADKLQALF GDNEAVKCAI
AGNLSYFHDD PATLWWVPFA MMQGSFLLTG ARFVQGGSQR LSSGLARAVR VGGGEVVLRR
VVSGVEIGEA GHAHRITHTA RDGSDPQTVE ALTVVGNAAP GALAALMPDA QGERLTRSYA
GRTPSLSLFA LTLGLSTPPR AFGFTSYATQ LLPDWMTTLA SYAEGKALMA GEPTGRMPPL
AIADYAAIDS GVPSPPYVLS VVGPDQTSNW SGLTQDDYRA KRSRWQQAII DQLDRNYPGL
AGAVTAASFN SAQSVQQYLN LPEGSVYGFA PLPPDNTGAP YRSPRTVLPG LYLASAYAGV
GGYSGVVQSA ALCADAILQD NPKR
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