| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4124 |
|---|
| Symbol | |
|---|
| ID | 4024646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 4589038 |
|---|
| End bp | 4590246 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637964332 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_571244 |
|---|
| Protein GI | 91978585 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.278491 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCGC TGCGCAGCCT CGCGTTTGGA CCCGGACGCG CGGTCGTCGT GCTGTCGTTC
ACCCAGATCC TGTGCTGGGG CATCCTGATC TACCCTCCTG TGCTGACCAT GCCGCATCTG
ACGGCGGATC GGGGCTGGTC GCTGGCGTTC GGGATGGCGG GATTTTCGCT GGCGCTGGTG
ATGTCCGGGA TCATGTCGCC GATCGTCGGC GGCCTGATCG ATCGCCGGGG CGGCAATCTC
GTGATGGCAC CCGGCGCATT GGCTGGGGCG CTCGGACTGG CGCTGCTCGC CAGCACCGAC
GCATGGCCGC TCTATTTCGC GAGCTGGGCG CTGATCGGCG TTTCGATGGC CTCGAGCCTG
TACGATCCGG CCTTCGCCAC GCTGGCGCGA TTGTTCGGCA GCTCGGCGCG GCGGCAGATC
ACCTTCGTCA CTTTCGCAGG GGGCTTCGCC TCGACGGTCG GCTGGCCGGC GACGCATCTG
TTGCTGGAAC ATGTCGGCTG GCGCGGCACC TATCTGGTGT TCGCCGCCGT GCTGGCCTTC
GTCGTCGCAC CGCTGCACGC CTTTGCGTTG CCGAGAACGC CGTCGCCGTC CCAGGGGGCG
GTCCCGCCCA GCCCGCATCT GGTGCCGGAG CAACCGCTGC GGCCCGAAGG GCGGGTTTTC
ATCCTGCTGG CGATGGGGTT CGCGCTGCAT GCGCTGATCC TGTCCGGCGT CACCTCGAAC
CTGCTGTCGA TGCTCGAACG CGGCGGGCTG AGCGCCGCCA CGGTGGTGAC GTTGGGGGCG
CTGTTCGGTC CCGCGCAGGT CGCGGCGCGC CTGGTCGATT TCCTGCTGGC GGGCCGCACC
CATCCGTTGT GGATCGCGCG CGGGGCGATC GCGCTGATGG CGGTCGCGTT CGCGATGCTG
GCGTTCGTCG GGGTATCGGT CGTCGTCGCA GGGCTGTTCT GCATCGCCTT CGGCGCGGCC
AACGGCGTGA TGACGATCGC GCGTGGCAGC CTGCCGCTGC TGATGTTCGG GCCGCAAGGT
TATGGCCGGG TGATCGGGCG CATCGCGCGG CCGGCGCTGT TCGTCCAGGC ATCGGCGCCG
TTCGTGGTCG CGGCGGCGGT CGAACGATTT TCCGACGCCG TGGTGATCGA GGTCGGGATG
GCGGCGGCGC TGGTCGGCGT CGGCTGCTTC CTGCTGATCC GGACGCCGCG CGCGGCGCCG
CGGCAATAG
|
|---|
| Protein sequence | MTALRSLAFG PGRAVVVLSF TQILCWGILI YPPVLTMPHL TADRGWSLAF GMAGFSLALV
MSGIMSPIVG GLIDRRGGNL VMAPGALAGA LGLALLASTD AWPLYFASWA LIGVSMASSL
YDPAFATLAR LFGSSARRQI TFVTFAGGFA STVGWPATHL LLEHVGWRGT YLVFAAVLAF
VVAPLHAFAL PRTPSPSQGA VPPSPHLVPE QPLRPEGRVF ILLAMGFALH ALILSGVTSN
LLSMLERGGL SAATVVTLGA LFGPAQVAAR LVDFLLAGRT HPLWIARGAI ALMAVAFAML
AFVGVSVVVA GLFCIAFGAA NGVMTIARGS LPLLMFGPQG YGRVIGRIAR PALFVQASAP
FVVAAAVERF SDAVVIEVGM AAALVGVGCF LLIRTPRAAP RQ
|
|---|
| |