Gene RPD_4122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4122 
Symbol 
ID4024644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4587054 
End bp4587845 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content66% 
IMG OID637964330 
ProductErfK/YbiS/YcfS/YnhG 
Protein accessionYP_571242 
Protein GI91978583 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGGA AAACCACTCT CGCGCTGCTC ACCAGTGTGT CCTGCCTTGC CGCCGGGTTG 
CCGCAGGCGG TGGCTTATGA AACCTCGCCG GTCCCCGATC CCTCGGTGAT CTACGCGCCG
CAGGTGCGCC AGCAAGTGCC GGTCCGCACC GCTTCGGCGC AGCGGTCCAA TATGGGCGGC
GGGTTTATCG AGTTTCTGTT CCGCGAGGGC GGGGAGTCGT CGCAATCGGG TTACTACGAG
CCGCCGCCGT CCTACGAGCA GCGTCGCCAC TATCTGCCGC CGATGGACCC GCAGGCCCCG
CAGGTGATGC GCCAGCAGGA GGCGATCGAT CCGGCGCGCC CGGCGTTCGA TCCGAAATTC
GAAAAGCAGC TGGTCGACTA CAACGGCGGC GAGAAGCCGG GCACCATCGT GGTCGATACC
CCGAACAAGT TCTTGTACCT GGTGCAGGGC GACGGGCGCG CGATGCGTTA CGGCATCGGC
GTCGGCCGGC CGGGCTTCAC CTGGTCGGGC GTCAAGACGA TCTCCGCCAA GCGCGAATGG
CCGAGCTGGA CGCCGCCGAA GGAAATGCTG GCGCGCCGGC CCGACCTGCC GCGGTACATG
GAGGGCGGTC CGGACAATCC GCTCGGGGCG CGGGCGATGT ATCTCGGCTC GTCGCTGTAT
CGAATCCATG GCTCCAACGA GCCGTGGACG ATCGGCACCA ACGTCTCGTC GGGCTGCATC
CGTATGCGCA ACGAGGACGT CATCGACCTC TACGGTCGCG TCAATGTCGG CGCGCGGGTC
CTGGTGATCT GA
 
Protein sequence
MFRKTTLALL TSVSCLAAGL PQAVAYETSP VPDPSVIYAP QVRQQVPVRT ASAQRSNMGG 
GFIEFLFREG GESSQSGYYE PPPSYEQRRH YLPPMDPQAP QVMRQQEAID PARPAFDPKF
EKQLVDYNGG EKPGTIVVDT PNKFLYLVQG DGRAMRYGIG VGRPGFTWSG VKTISAKREW
PSWTPPKEML ARRPDLPRYM EGGPDNPLGA RAMYLGSSLY RIHGSNEPWT IGTNVSSGCI
RMRNEDVIDL YGRVNVGARV LVI