Gene RPD_4119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4119 
Symbol 
ID4024641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4584044 
End bp4585087 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content67% 
IMG OID637964327 
Productglycosyl transferase family protein 
Protein accessionYP_571239 
Protein GI91978580 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.527545 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCAG GTAGTGACGT CTCAGGTCTG AACAGCGGCG AAAGCGCCGC TGCGGCGGGG 
CTGTCCATCG TCGTGCCGGT CTTTAACGAG GCCGCCGGAC TGCAGGCGCT GCATCAGCGC
CTCTCGGTAC TGGCGAACAC GCTGCGGCAA CGCTACGCGC TGGCCTGTGA GGTCGTCTAT
GTCGACGACG GCAGCTCGGA CTCGACGCTG AGCATCGCCC GCAACCTTCC CGCCAACGGC
ATCGACGTCC AGATGGTGTC GCTGTCGCGC AATTTCGGCA AGGAGGCGGC GCTCCTCGCC
GGCCTCGATC ACGCGCGCCG CGGCGCGGTG CTGTTCATGG ACGGCGATGG CCAGCACGCG
CCGGAGATGG TCGAAAAGCT GGTCTCGCAC TGGATCGATG ACGGCTACGA TGTCGTCTAC
ACCGCCAAGG CGCATCGCGA CCACGAGCCG CGGCTGCGCC GCGCCGCGGT GCGCGGCTTC
TACGCGCTGA TCAATTGGGG CGCACGGCAG AAGATTCCGG AAGACGCCGG CGACTTCCGT
CTGCTGTCGC CGCGCGCGGC GGCGGCGCTG AAGCAGCTCC CCGAACGCAA TCGTTTCTTC
AAGGGGCTGG CGAGCTGGAT CGGCTTTCGT CAGTTCCGCG TCGACTACGA GCCGGAGCCG
CGCGCGCACG GTTTCACGAC GTTCAGCGCC GGCCGGCTGA TCGGCCTGTC GATCGAAGGG
CTGACCTCGT TCTCGGTGGC CCCGCTGCGG ATCGCCAGCG CGCTCGGCGC GGCGCTGGCG
ATCGGCGCGT TTCTGTTCGG CCTGTCGATC CTGTGGGAGA CCTGGATCGA CGGCAAATCC
GTGCCCGGCT ATCCGTCGCT GATGGTCGGC ATGATGACGA TCGGCGGCGT GCAGTTGCTG
ATGATCGGAA TCGTCGGCGA GTATATCGGC AAGATCCTGT CCGAGCTGAA GGCGCGGCCG
ATCTACTTCG TGGCCGAGCA CACCGTCCGG CATTCAGACC CGGCCGCCGA CGCCAGCCCG
GCCAAACAGT CCGCGGCCGA ATGA
 
Protein sequence
MKPGSDVSGL NSGESAAAAG LSIVVPVFNE AAGLQALHQR LSVLANTLRQ RYALACEVVY 
VDDGSSDSTL SIARNLPANG IDVQMVSLSR NFGKEAALLA GLDHARRGAV LFMDGDGQHA
PEMVEKLVSH WIDDGYDVVY TAKAHRDHEP RLRRAAVRGF YALINWGARQ KIPEDAGDFR
LLSPRAAAAL KQLPERNRFF KGLASWIGFR QFRVDYEPEP RAHGFTTFSA GRLIGLSIEG
LTSFSVAPLR IASALGAALA IGAFLFGLSI LWETWIDGKS VPGYPSLMVG MMTIGGVQLL
MIGIVGEYIG KILSELKARP IYFVAEHTVR HSDPAADASP AKQSAAE