| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4117 |
|---|
| Symbol | hisZ |
|---|
| ID | 4024639 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 4581817 |
|---|
| End bp | 4582974 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637964325 |
|---|
| Product | ATP phosphoribosyltransferase regulatory subunit |
|---|
| Protein accession | YP_571237 |
|---|
| Protein GI | 91978578 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3705] ATP phosphoribosyltransferase involved in histidine biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGA CCGCCGCCGC TCGAGCGACC GGATCCGCCG AGTGGGCGGA GGCGCTGCTG
CAATCGTTCA CCAAGGCCGG CTATGTCCGG GCCGAACCGG CGATCCTGCA GCCTGCGGAG
CCGTTCCTCG ACCTCTCCGG CGAGGATATC CGCAAGAACC TCTACCTCAC CACCGACGGC
AGCGGCGAAG AGTTGTGCCT GCGGCCCGAC CTGACGATTC CCGTGGCGCG GGACTATCTC
GCCTCGCCGG GCGCGGGTCA GCCGACCGGC TTCTGTTATC TCGGCCCGGT GTTCCGGCAG
CGCAGCGGCA AGCCGAGCGA GTTCCTCCAG GCCGGGATCG AATCATTCGG CCGCCAGGAC
CGCGCCGCGG CCGACGCCGA GATGCTGGCG CTGGGACTGG AAGCCACGAC GGCGTTCGGC
GTCGGCGAGG TCGACATCCG CACCGGCGAC GTCGCGCTGT TCTCCGCGCT GATCGATGCG
CTCGGCCTGT ATCCGGTGTG GCGGCGGCGG CTGATGAAGG ATTTCAACCG CAAGGTGAGC
CTCGCGCAGG ACCTCGAGCG GCTGACGCTC GCGACCTCCG GCGGCAACGA ATATGAGGGC
GTGCTCGCGG CGCTGGCCGG CTCCGACCGC AAGGCGGCGC TGGCGCTGGT CACCGACCTG
ATGTCGATCG CCGGCGCGAC CACGCTCGGC GGCCGCTCGG TCGCTGAGAT CGCCGACCGC
TTTCTCGAAC AATCGACGCT GAAGAGCGGC GCCTTGCCGC GCGACGCGCT GCAGAAAATT
CAACGCTTTC TCGCGATCAG CGGCGATCCG AACGAGGCGC TGACGCAGCT GCGCGCGCTT
GCCGCCGACG CCAAGCTCGC GATCGAGCCG GCGATCGATC AGTTCGAGAG CCGGATCGGT
TTCATGGCCG CGCGCGGCAT CGATCTGAAG AAAACGCGGT TCTCGACTTC GTTCGGCCGC
GGCGTCGATT ATTATACCGG GTTCGAATTC GAACTGCACC GCGCTGGCAA CGGCGACGAT
CCGCTGGTCG CCGGCGGGCG CTATGACGGG TTGATGACTC AGCTCGGCGC CGCCGCGCCG
ATCCCCGCGG TCGGCTTCTC GATCTGGATC GAGGCGATGA CGCAGTCCGG CCCCGCCAAA
ACTGGGAGCG CGTCATGA
|
|---|
| Protein sequence | MTKTAAARAT GSAEWAEALL QSFTKAGYVR AEPAILQPAE PFLDLSGEDI RKNLYLTTDG
SGEELCLRPD LTIPVARDYL ASPGAGQPTG FCYLGPVFRQ RSGKPSEFLQ AGIESFGRQD
RAAADAEMLA LGLEATTAFG VGEVDIRTGD VALFSALIDA LGLYPVWRRR LMKDFNRKVS
LAQDLERLTL ATSGGNEYEG VLAALAGSDR KAALALVTDL MSIAGATTLG GRSVAEIADR
FLEQSTLKSG ALPRDALQKI QRFLAISGDP NEALTQLRAL AADAKLAIEP AIDQFESRIG
FMAARGIDLK KTRFSTSFGR GVDYYTGFEF ELHRAGNGDD PLVAGGRYDG LMTQLGAAAP
IPAVGFSIWI EAMTQSGPAK TGSAS
|
|---|
| |