| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4109 |
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| Symbol | |
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| ID | 4024631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4573977 |
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| End bp | 4575323 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637964317 |
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| Product | three-deoxy-D-manno-octulosonic-acid transferase-like |
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| Protein accession | YP_571229 |
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| Protein GI | 91978570 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGGCG CGTCCACTCC GCGGTGGCAG ACGGGGCCTT CGTTGGCCGA ACCGTTGCCG
ATGACGCTGC GCGTGTATCA AAAACTCACG GCCGGGTTTG CGCCGCTGGC CACGCTGCTG
ATCAAGCGTC GGCTCAAGCA GGGCAAGGAA GAGGCGGCGC GCGTCGACGA GCGCCGCGGC
GTCGCCGCGC ATGTGCGGCC GCACGGGCCG CTGGTGTGGA TCCACGGCGC CAGCGTCGGC
GAAGTGCTGG CCGCGGCCGG TCTGATCGAG CGGCTGCGCG CGCTCAACCT GCGCATTCTA
CTAACCTCCG GCACCGTGAC CTCTGCGTCG GTGGTGGAAA AGCGGTTTCC GCCGGATATC
ATCCATCAGT TCATTCCCTA CGACGCGCCG CGTTTCGTGG CGCGCTTTCT CGATCACTGG
CAGCCGTCGC TGGCGCTGTT CATCGAATCC GATCTGTGGC CGAACCTGAT CCTCGCGTCC
GCCGCGCGGC GGCTGCCGAT GGTGCTGATC AACGGCCGGA TGTCGCAGCG TTCGTTCCCG
CGCTGGCGGC GCGCCGCGGC GACGATCGGC ACGCTGCTCG GCAAGTTCGA CATCTGCCTC
GCGCAATCGC GGATGGATGC CGAGCGGTTT TCGGCGCTCG GCAGCCGCAA CGTCATCACC
ACCGGCAATC TCAAGATGGA TGTCGATCCG CCGCCGGCCG ATCCGGCGCG GCTGGAGCGG
CTGATGGCGG TGACGCGCGG CCGGCCGGTG ATCGTCGCCG CCTCGACCCA TCCGGGCGAG
GAGGAAATTT TGCTCGACGT CCACCGCACG CTCACCGGCG TGTTCCCGAC GCTGCTCACC
GTGATCGTGC CGCGGCATCC GCATCGCGGC GAACAGATCG GCGGGCTGGT CGAGGCCGTC
GGCTTGCAGA CCGCGCTGCG CTCGCGCGAG CAGCTTCCGA CCGCGGCGAC CGCGGTCTAT
GTCGCGGACA CCATGGGCGA ACTCGGCCTG TTCTATCGGC TGGCGCCGAT CGTGTTCATG
GGCGGCTCGC TGATCGAGCA TGGCGGCCAG AATCCGATCG AGGCGGTCAA GCTCGGCGCG
TCGATCGTGC ACGGCCCGCA CGTCTCGAAT TTCAGCGATG TCTATCGTGC GCTCGACGAC
GAAGGCGGCG CGTTCAGCGC GGGCGACGTC GACGCGCTGG TGCGCCGGTT CGGGCAGCTG
CTGTCCGACG ACCACGCGCG CCAGACCTCG ATCGATGCCG CCACGGCCGT GGTCGAGCGG
CTCGGCGGTG CGCTCGACCG CACGCTCTCC GCGCTCGAGC CCTATCTGCT GCAATTGCAG
ATCGAGCAGG GCGCCGCCGA TGCGTGA
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| Protein sequence | MTGASTPRWQ TGPSLAEPLP MTLRVYQKLT AGFAPLATLL IKRRLKQGKE EAARVDERRG
VAAHVRPHGP LVWIHGASVG EVLAAAGLIE RLRALNLRIL LTSGTVTSAS VVEKRFPPDI
IHQFIPYDAP RFVARFLDHW QPSLALFIES DLWPNLILAS AARRLPMVLI NGRMSQRSFP
RWRRAAATIG TLLGKFDICL AQSRMDAERF SALGSRNVIT TGNLKMDVDP PPADPARLER
LMAVTRGRPV IVAASTHPGE EEILLDVHRT LTGVFPTLLT VIVPRHPHRG EQIGGLVEAV
GLQTALRSRE QLPTAATAVY VADTMGELGL FYRLAPIVFM GGSLIEHGGQ NPIEAVKLGA
SIVHGPHVSN FSDVYRALDD EGGAFSAGDV DALVRRFGQL LSDDHARQTS IDAATAVVER
LGGALDRTLS ALEPYLLQLQ IEQGAADA
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