Gene RPD_4106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4106 
Symbol 
ID4024628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4571677 
End bp4572504 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content71% 
IMG OID637964314 
Productdienelactone hydrolase 
Protein accessionYP_571226 
Protein GI91978567 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTGC CTTTGTTGTT GCAGATCGGG ATTCTGCTCG CCGCGGGACA CGCCGCCGTC 
GCCGCGCCGG CGCCCGAAAG GGTGGACATC GCCGGCGCCG ACGGCAAGCT CAGCGCGCTG
CTGTACAAGC CCGACGGCGA CGGGCCGTTT CCGGCGGTCA TCGCGCTGCA TGGCTGCGGC
GGCCTCGCCG GCAAATCGGG TCCGATCAAG CGGCGTTACG CCGATTGGGC TGAGCAATTG
CTGAAATCCG GCCATGCCGT GCTGCTGCCG GACAGCTACG GCTCCCGCGA TCTCGGCCCG
CAATGCCACG CCAAGACCCC CCGCGTGCTG GCGCGGCGCG AGCGGCTCGC CGACATCCTC
GCGGCGCGGC ACTGGCTCGC GCAGCAGCCC TGGACCGCGC GTCAGCGCAT CGGCCTGATC
GGCTGGGACA ATGGCGCCAG CGCGCTGCTG TGGGCGGTTC GCCCGCAAAC CGCGCCCGGC
AGGGGCGAGC CGGACTTCCG CTCCGCGGTC GCGTTTTATC CGGATTGCCG GACATCGTCC
CGGCTGGGGT GGAGCGCCCG GGCGCCGACG CTGGTGCTGA TCGGCAGCAG CGACGATATC
AGCTCGCCGA GCGCGTGCCG GTCGATGGTC GACGGCGCGC AAGGCCGCAG CGCGTTGGCC
CGGATGGTGG TTTATCCGGG GGCGTATCAC GAGTTCGACC ACATCGGCGT CACGCCGCAT
CTCACCAGCG CCAACGACCC GAGCGTGCCC GAACAGGGCC ACCTCGGCTT CGATCCCGCC
GCGCGCAGCG ACGCCGAGAA GCGCGTGATG CACTGGCTGG GGCGGTGA
 
Protein sequence
MRLPLLLQIG ILLAAGHAAV AAPAPERVDI AGADGKLSAL LYKPDGDGPF PAVIALHGCG 
GLAGKSGPIK RRYADWAEQL LKSGHAVLLP DSYGSRDLGP QCHAKTPRVL ARRERLADIL
AARHWLAQQP WTARQRIGLI GWDNGASALL WAVRPQTAPG RGEPDFRSAV AFYPDCRTSS
RLGWSARAPT LVLIGSSDDI SSPSACRSMV DGAQGRSALA RMVVYPGAYH EFDHIGVTPH
LTSANDPSVP EQGHLGFDPA ARSDAEKRVM HWLGR