| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4105 |
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| Symbol | xseA |
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| ID | 4024627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4569989 |
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| End bp | 4571599 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637964313 |
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| Product | exodeoxyribonuclease VII large subunit |
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| Protein accession | YP_571225 |
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| Protein GI | 91978566 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1570] Exonuclease VII, large subunit |
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| TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGAC TGCTCGCCCC CGAAACCCTC GCCAATGTCG GCGAATTCAC CGTCTCCGAA
CTGTCGCAGG CGCTGAAGCG GACGGTCGAG GACAGCTATG GCCATGTCCG GGTGCGCGGC
GAAATCTCCG GGTTCCGCGG CGCGCATTCG TCCGGGCATT GCTATTTCGC GCTGAAGGAC
GAGAGCGCCA AGATCGAGGC GGTGATCTGG AAGGGCGTGG CGGGGCGGAT GCGGTTCAAG
CCGCAGGAAG GCCTCGAGGT CATCGCCACC GGCAAGCTCA CCACCTATCC GGGCTCGTCG
AAATATCAGA TCGTGATCGA GGCGCTGGAG CCCGCCGGCG TCGGAGCGCT GATGGCGCTG
ATGGAAGAGC GCAAGAAGAA GCTCGGCGCC GAGGGCCTGT TCGACGAAGC GCGCAAGCAG
CTTTTGCCCT GGCTGCCGGA CGTGATCGGC GTGGTCACCT CGCCGACCGG CGCGGTGATC
CGCGACATTC TCCACCGGCT GGAAGACCGC TTCCCGCGCC GGGTCCTGGT GTGGCCGGTG
AAGGTCCAGG GCGAAGGCTC GGCCGAACAG GTCGCGGCCG CGATCCACGG CTTCAACGCG
CTGCCCGAGG GCGGCCCGAT CCCTCGGCCC GATCTGTTGA TCGTCGCGCG CGGCGGCGGC
TCGCTCGAGG ATCTGTGGTC GTTCAACGAG GAAATCGTGG TGCGCGCCGC GGCGGAAAGC
ATGATCCCGC TGATCTCCGC GGTCGGTCAC GAGACCGACG TGACGCTGAT CGATTTCGCC
GCCGACAAGC GCGCGCCGAC GCCGACCGCC GCCGCCGAAA TGGCGGTGCC GGTGCGTGCC
GAACTGTTCG TCGAGGTGCA GAGCTTTTCG CGGCGGATGA TGCTGTGCTG GACGCGCGGT
CAGGATTCCC GCCGCAACGA ACTCCGCGCC GCCGCCCGCG CTCTGCCGGC CGCAAGCGAA
CTGCTCGCGA TCCCGCGGCA ACGGCTCGAC ACGGCGGCGG CGGGGCTGCC GCGGGCGCTG
CGCGCCAATA CGCATGCGCA TCATCGCCGC TTCGCCAAGG CCGCGGCGGG CATCACCCTC
AACGTTCTGC GGGCGCAGGT CAGCCACAGC GCGCAGCGGC TCGGCATCAC CGGCGAACGG
CTGAAGCATG GCGCCCGCGC CACGCTGCGC CATCGCCGCG ACCGCTTCGA CGGTCTCGCG
ATCCGGCTGC AGGCCTCGAA ACTCGCCAAT GAGCAGGCGC AGCGGATGCA GATCGCGCGC
GAGCGCGAGC GGATGCAGCG GCTCGCCGAG CGCGCGCGGC GTGCGCTGAC GACGCTGCTC
GATCGTCAGC AGGCGCGCCT GACGCAATCC GGCAAATTGC TGACCGCCCT GTCCTATCGC
GGCGTGCTGG CGCGCGGCTT CGCACTGGTG CGCGACGCCG ACGGCCACGC CGTCCATGCC
GCCGCAGCGG TGAGCGCCGG CGCGCAACTC AGCGTCGAAT TCGCCGACGG CCGCGTCAGC
GTCACGGCGG ATGGCGGCCA TGCCGGCGAA CCAGCAAAGC CGACGACGCC AGCGTCCAAA
CCAACGCAGA AGCGCACACC GAAGCCGGTC GATCAGGGGT CGCTGTTCTA G
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| Protein sequence | MARLLAPETL ANVGEFTVSE LSQALKRTVE DSYGHVRVRG EISGFRGAHS SGHCYFALKD
ESAKIEAVIW KGVAGRMRFK PQEGLEVIAT GKLTTYPGSS KYQIVIEALE PAGVGALMAL
MEERKKKLGA EGLFDEARKQ LLPWLPDVIG VVTSPTGAVI RDILHRLEDR FPRRVLVWPV
KVQGEGSAEQ VAAAIHGFNA LPEGGPIPRP DLLIVARGGG SLEDLWSFNE EIVVRAAAES
MIPLISAVGH ETDVTLIDFA ADKRAPTPTA AAEMAVPVRA ELFVEVQSFS RRMMLCWTRG
QDSRRNELRA AARALPAASE LLAIPRQRLD TAAAGLPRAL RANTHAHHRR FAKAAAGITL
NVLRAQVSHS AQRLGITGER LKHGARATLR HRRDRFDGLA IRLQASKLAN EQAQRMQIAR
ERERMQRLAE RARRALTTLL DRQQARLTQS GKLLTALSYR GVLARGFALV RDADGHAVHA
AAAVSAGAQL SVEFADGRVS VTADGGHAGE PAKPTTPASK PTQKRTPKPV DQGSLF
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