Gene RPD_4103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4103 
Symbol 
ID4024625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4567326 
End bp4568231 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content65% 
IMG OID637964311 
Productalpha/beta hydrolase fold 
Protein accessionYP_571223 
Protein GI91978564 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.822842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGATC TCGCCGATTT GTTTCCAGGC TTCGGTTCGG AATGGATCAA CACCACGTCC 
GGGCGCATCT TCGCGCGCAC CGGCGGCGAC GGCCCGCCGC TGCTGCTGCT GCACGGCTTC
CCCCAGACGC ATGTGATGTG GCATCGGGTG GCGCCGAAGC TCGCCGAGCG CTTCAAGCTG
ATCATCGCCG ATCTGCCGGG CTATGGCTGG TCCGACATGC CGGAGAGCGA CGCCGCGCAC
ACGCCCTACA CCAAGCGGGC GATGGCCACA CAACTGATCG AGGCGATGGA GCAGCTCGGC
CACGTGCATT TCGGGCTCGC TGGTCACGAC CGCGGCGGCC GCGTCAGCTA CCGGCTCGCG
CTCGATCATC CGGGACGGCT GTCGAGGCTC GCGGTGCTCG ATATCCTGCC GACCTACGAA
TATTGGATGC GGATGGACAG GGCCTATGCG CTCAAGATCT ATCACTGGAG CTTCCTCGCC
CAGCCCGCGC CGCTGCCGGA GACGCTGATC GGCGCGAGCC CGGATTTCTA TCTGAAGACC
ACGCTCGCGA GCTGGACGAA GAAGAAGGAT CTGTCGTGTT TCGATCCGCG CGCGCTGGAG
CATTACCTCG CGCCGTTCCG CGATCCGATG CGGCTCCATG CGATGTGCGA GGATTATCGC
GCCGGCGCCG ATGCCGATGT CGCGCATGAC AAGGTCGATG TCGACGCCGG CAACAAGATC
CCGGTGCCGA TGCTGGCGCT GTGGGGCGAT GCCGGCATCG CCCAATCAGC CGCGACGCCG
CTCGACACCT GGAAGAATTG GGCCAAAGAC GTGCGCGGAG GTCCGATCGA TTCCGGCCAC
TTCCTCACCG AAGAAGCGCC GGCGCAGACC GCGAATGCGC TGCTGGAATT TTTCACCGAA
TCGTAG
 
Protein sequence
MPDLADLFPG FGSEWINTTS GRIFARTGGD GPPLLLLHGF PQTHVMWHRV APKLAERFKL 
IIADLPGYGW SDMPESDAAH TPYTKRAMAT QLIEAMEQLG HVHFGLAGHD RGGRVSYRLA
LDHPGRLSRL AVLDILPTYE YWMRMDRAYA LKIYHWSFLA QPAPLPETLI GASPDFYLKT
TLASWTKKKD LSCFDPRALE HYLAPFRDPM RLHAMCEDYR AGADADVAHD KVDVDAGNKI
PVPMLALWGD AGIAQSAATP LDTWKNWAKD VRGGPIDSGH FLTEEAPAQT ANALLEFFTE
S