| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4092 |
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| Symbol | |
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| ID | 4024614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4553328 |
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| End bp | 4555373 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637964300 |
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| Product | peptidase M23B |
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| Protein accession | YP_571212 |
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| Protein GI | 91978553 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCCAAA GGGTTTCACG GGGACGCAGC CACGGGCGTG AGATCGGCAT GATCGATCTC
GGTCACGAGC CGCCGCTTTC TGTCGACGGC TCCGAAGCGG CGGTGATCGA TCGCCGCCGC
GTGTCGGTAC AATGGTTCAG CGGCACGATT CTGACCGGCC TGTGCGGCGC AGCCTTGATC
GGCGGCGCCG TTTTCGCGTC GCTCGACGGC GAAACCACCT TCGCCAAAGC GCCGGAGCGG
GTCGAGGCCG CGCTGCGCGG GGCGTTCGGC GCCGACAAGA ACGCCGCCCT GCATAAGAGC
GACCGCCTGC CCCCGCCGAG CGAATCGGCC GCCGCGCGCA ACGTGATTCG GGTCTCGACG
GTGTCCCGCG TCGGCAATCG CGACGTCGTC CGGGTCCGCC CCTTCATCAA GATTGCCGGC
AACCTGTCGC TGACCACCAG CGATCTGTCC GCCAAGATCC CGGCCTTCAA TGCGCAACGG
ATGCTGAGCG ACGTCGGCGC CGCCGCGCCC GCGGCAGAGG ATGCGCAGAA CCCCGACGCT
GTCGAGCCAG ACGCCGAAGT CTCGTTCGTC ACCCGCGATC TCGGCCAGGT GCTGCCCAAG
GCGAAGATCG CCGGCCAGAT CCCGCCCGAT GAAATCCTGA TGCGGGTGCG CGACGCCGCG
AACTGGAAGG GCAATAGCGG CGTGCGCTAC GCCAGCGCGA CCTCCGGCGA GATCGGCGGC
GACATGAGGC TCGCTTACGC GCCCGAAGGC GCCTCCGCCG ACCCTTATGC CGGCTTCGAA
ACCCGGATCG TGCCTGAAAA CGTCACGCTG CTGCCGAAGA CCAAGGAACA GGCGACCGGC
GGCAATCCCA CCGGCGAGCG CGTCCATCTC GTCAAGAAGG GCGACACCGT GGTGTCGGTG
CTGCGCGACC AGGGCGCCAG CGAGGAGGAC GCCAATGCGG TCGCGGCGGC GCTGGGCGCA
CGCGGACGCA GCGGCGGGGT GAAAGAAGGC CAGAAACTGC GAATCCTGAT GGAGCCCGCC
GGCGCCGGCA AGCCGTCGCA GCCGTTCCGG GTGATCATCG CCAACGAATC CACCGTCGAG
GCCGTCGCGG CGCTGTCCGA TCTCGGCCGA TACGTCGCCG TCGACGTCCA GAGCCTCAAC
ACCGTCAGCG ACACCGCCGA CAACAGCGAC GAGGACGAGG ACGACGGCAC CGGCGTTCGC
CTCTACCAGT CGATCTACGA GACCGCGCTG CGCAACAAGG TGCCGCAGGC GATCATCGAC
GACATGATCA AGATCTATTC CTACGACGTC GACTTCCAGC GCAAGGTCCA GGCCGGCGAC
TCGTTCGAGG TGTTCTACGC CGGCGACGAC GAGACCACCG CCACCATCGA GAAGAACGAC
GTGCTGTTCG CCTCGCTCAC CGTGGGCGGC GAGACCAAGA AATACTACCG CTTCCAGACC
CCCGACGACG CCGTGGTCGA TTTCTACGAC GAGAGCGGCA AGAGCGCGAA GAAGTTCCTG
GTGCGCAAGC CGGTCAACAA CGCGATCATG CGCTCGGGCT TCGGCGGCCG CCGCCATCCG
ATTCTCGGCT ACGTCAAAAT GCACACCGGC GTCGACTGGT CGACGCCCTA CGGCACGCCG
ATCTTCGCCT CCGGCAACGG CGTGATCGAA AAGGCCGGCT GGGAAGGCGG CTACGGCAAA
TATATCCGCG TCAAACACAA CAACGGCTAC GAGACCGCCT ACGGCCACAT GTCGGCGTTC
GCCAAGGGCA TGGAGCCCGG CAAGCGGGTG CGCCAGGGCC AGGTGATCGG CTTCGTCGGC
TCCACCGGCC TGTCGACCGG CGCACATGTC CACTACGAAA TCCTCGTCAA CGGCCGCTTC
GTCGACCCGA TGCGCGTCAA GCTACCGCGC GGTCGCTCGC TCGACGGCCC GCTGATGGCG
AGCTTCGAAA AAGAGCGCGA CCGGCTCGAC GGCATGTTGA CCAGCCGCGG CGGCAGCAGA
ATGTCGGAAG ACCTGACCGC AGCGGCCCCG GTGCGCAGCG TGAACGCGGC GGCGGCGCGG
AAGTAG
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| Protein sequence | MSQRVSRGRS HGREIGMIDL GHEPPLSVDG SEAAVIDRRR VSVQWFSGTI LTGLCGAALI
GGAVFASLDG ETTFAKAPER VEAALRGAFG ADKNAALHKS DRLPPPSESA AARNVIRVST
VSRVGNRDVV RVRPFIKIAG NLSLTTSDLS AKIPAFNAQR MLSDVGAAAP AAEDAQNPDA
VEPDAEVSFV TRDLGQVLPK AKIAGQIPPD EILMRVRDAA NWKGNSGVRY ASATSGEIGG
DMRLAYAPEG ASADPYAGFE TRIVPENVTL LPKTKEQATG GNPTGERVHL VKKGDTVVSV
LRDQGASEED ANAVAAALGA RGRSGGVKEG QKLRILMEPA GAGKPSQPFR VIIANESTVE
AVAALSDLGR YVAVDVQSLN TVSDTADNSD EDEDDGTGVR LYQSIYETAL RNKVPQAIID
DMIKIYSYDV DFQRKVQAGD SFEVFYAGDD ETTATIEKND VLFASLTVGG ETKKYYRFQT
PDDAVVDFYD ESGKSAKKFL VRKPVNNAIM RSGFGGRRHP ILGYVKMHTG VDWSTPYGTP
IFASGNGVIE KAGWEGGYGK YIRVKHNNGY ETAYGHMSAF AKGMEPGKRV RQGQVIGFVG
STGLSTGAHV HYEILVNGRF VDPMRVKLPR GRSLDGPLMA SFEKERDRLD GMLTSRGGSR
MSEDLTAAAP VRSVNAAAAR K
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