Gene RPD_4087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4087 
Symbol 
ID4024604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4542716 
End bp4543258 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content69% 
IMG OID637964290 
Productmethylated-DNA--protein-cysteine methyltransferase 
Protein accessionYP_571207 
Protein GI91978548 
COG category[L] Replication, recombination and repair 
COG ID[COG0350] Methylated DNA-protein cysteine methyltransferase 
TIGRFAM ID[TIGR00589] O-6-methylguanine DNA methyltransferase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGC GCAACTACAC GATGTTCGAC ACCGCGATCG GCCGCTGCGG CATCGTCTGG 
GGCGAGCGCG GCGTAGTCGC GGTGCAACTG CCGCAGCAGA ACGAGGCGCA GACCCGCGCC
CGGATCAGCC AGCGCTCCGG CGACATCCCG GAAGCCGCGC CGCCGCCGCA CGTGCAGCAA
GCGATCGACG GCATCGTCGC GCTGCTCGCC GGCGCGCCGG TCGATCTCAC CGGAATTGAT
CTCGACCTCG ACGGCGTGTC CGATTTCCAG CGCGAGGTTT ACGATATCGC GCGAACCATC
CCGCCGGGCC AGACGCTGAG TTATGGCGAC ATCGCCAAGC GGCTCGGCGG AGTCGAACTT
GCGCGCGAGG TCGGGCAGGC GCTCGGCCGC AATCCGGTCC CGGTCATCGT GCCGTGCCAT
CGCGTGCTCG CCGCGGGCGG CAAGCCCGGT GGATTTTCCG CCAATGGCGG CGTCGCCACC
AAGCTGAAGC TGCTGGCGAT CGAGGGAGCG GCGGTCAACT ACACGCCGAG TCTGTTCGAC
TGA
 
Protein sequence
MTARNYTMFD TAIGRCGIVW GERGVVAVQL PQQNEAQTRA RISQRSGDIP EAAPPPHVQQ 
AIDGIVALLA GAPVDLTGID LDLDGVSDFQ REVYDIARTI PPGQTLSYGD IAKRLGGVEL
AREVGQALGR NPVPVIVPCH RVLAAGGKPG GFSANGGVAT KLKLLAIEGA AVNYTPSLFD