| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4085 |
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| Symbol | |
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| ID | 4024602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4541110 |
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| End bp | 4541952 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637964288 |
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| Product | 5-carboxymethyl-2-hydroxymuconate delta-isomerase |
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| Protein accession | YP_571205 |
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| Protein GI | 91978546 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTCG TTCGATATGG TGCGGTTGGC CAGGAGAAAC CCGGCCTGAT CGACAAATCA
GGCCAGTTGC GCGATCTGTC GGCGCAGGTC GCAGACCTTG CCGGCGACGC GTTTGCGCCG
GCCAGCCTCG CCAAGCTCGC CGCGATCGAT CCTGCAAGCC TGCCCGAAGT GTCCGGCCAC
CCGCGGATCG GCTCGCCGGT CGGCGGCGCC CCGAAATTCA TCGCGATCGG ACTGAACTAC
GCGGATCACG CCGCCGAAGC CAACATGCCG ATCCCGGCCG AGCCGATCGT GTTCATGAAA
GCGTCGAGCT CGCTGTGCGG CCCGAACGAC AATGTCGAAA AGCCGCGCGG CTCGACCAAG
CTCGACTGGG AAGTCGAACT CGCGATCGTG ATCGGCACCC GCGCCAAATA CGTCTCCGAG
GCTGATGCGC TGAACTACGT CGCCGGCTAC GCGGTCTGCA ACGACGTCTC CGAGCGCGCC
TTCCAGCTCG AGCGGCTCGG GCAATGGACC AAGGGCAAGT CACACGACAC GTTCGGGCCG
CTGGGCCCGT GGCTTGTGAC CAAGGACGAC ATTGCGGATG TGCACGGGCT GGGGATGTGG
CTCGACGTCA ACGGCAAGCG CTGCCAGACC GGTTCGACGG CGACGATGAT TTTCAACGTG
CCGAAGATCG TGTCGTATCT CTCTGAAGTC ATGACACTGC TGCCCGGCGA CGTCATCACC
ACCGGCACGC CGCCCGGCGT CGGCATGGGC ATGAAGCCGC CGCAGTTTCT CAATGTCGGC
GACGTCGTCA CGCTCGGCAT CGACGGCCTC GGCGAGCAGA AGCAGACCAT CGTCGCTGCG
TAG
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| Protein sequence | MKLVRYGAVG QEKPGLIDKS GQLRDLSAQV ADLAGDAFAP ASLAKLAAID PASLPEVSGH
PRIGSPVGGA PKFIAIGLNY ADHAAEANMP IPAEPIVFMK ASSSLCGPND NVEKPRGSTK
LDWEVELAIV IGTRAKYVSE ADALNYVAGY AVCNDVSERA FQLERLGQWT KGKSHDTFGP
LGPWLVTKDD IADVHGLGMW LDVNGKRCQT GSTATMIFNV PKIVSYLSEV MTLLPGDVIT
TGTPPGVGMG MKPPQFLNVG DVVTLGIDGL GEQKQTIVAA
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