| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4078 |
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| Symbol | |
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| ID | 4024595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4533568 |
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| End bp | 4534551 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637964281 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_571198 |
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| Protein GI | 91978539 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAATCG CGATTCTCGA CGATTACTTC GACACGCTGC GGACGCTGCC TTGCTTCGCC
AAGCTGGCGG GCCACGACGT CTCGGTCTTC AACGATCACT TGCAGGACAC CGACGCGCTG
GCGGAGCGGC TGAAGGAAAC AGAGGCGCTG GTGCTGATCC GCGAGCGCAC CCAGATCCGC
GCAGCCCTGT TGGAGAAACT GCCGAAGCTG AAGCTGATCA GCCAGCGCAG CGTCTACCCG
CACATCGATA TCGACGCCTG CACGCGGCTT GGCATCGTCG TCTCGTCGAA CATGCACGCC
GGCACGCCGT CATACGCCGC GGCGGAGCTG ACCTGGGGGC TGGTGCTGGC GGCGATGCGG
CAGATTCCGC AGCAGGCGAC GGCGCTGAAA GCCGGCATCT GGCAGATCGG CGTCGGACAT
ACGCTGCGTG ACAAGACGCT CGGCATCTTT GGCTACGGCC GGATCGGCAG CGTCGTCGCA
GGCTATGGCC GCGCTTTCGG CATGACGGTT CTGGTGTGGG CGCGCGAACC CAGTCTTGCG
CAGGCCCGCG CCGATGGCCA TCAGATCGCT GGTAGCAAGG AAGAATTCTT CGCGCAGAGC
GACGTGCTGT CGCTGCACAT TCGGTTGGTG GACGCCACCC GCGCCATCGT CACGCGGTCC
GATCTGGCGC GGATGAAGCC GGGCGCCCTG CTGGTCAATA CCAGCCGGGC CGGGTTGATC
GAGCCCGGCG CGCTGGTCGA GGCGCTGCGC GCGGGGCGTC CCGGCATGGC GGCGATCGAC
GTGTTCGACG CCGAGCCGCT ACGCGATCCG AGCGATCCGT TACTGAAGAT GGACAATGTC
GTCGCGACCC CGCACATCGG CTACGTGTCG CGCGATGAAT ACGAGTTGCA GTTCAGTGAG
ATCTTCGACC AGATCGTGGC ATATGCGGCT GGTGAGCCGA TCAACGTGGT CAATCCGGCG
GTGACGTCGC ACGCACGGCG CTGA
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| Protein sequence | MKIAILDDYF DTLRTLPCFA KLAGHDVSVF NDHLQDTDAL AERLKETEAL VLIRERTQIR
AALLEKLPKL KLISQRSVYP HIDIDACTRL GIVVSSNMHA GTPSYAAAEL TWGLVLAAMR
QIPQQATALK AGIWQIGVGH TLRDKTLGIF GYGRIGSVVA GYGRAFGMTV LVWAREPSLA
QARADGHQIA GSKEEFFAQS DVLSLHIRLV DATRAIVTRS DLARMKPGAL LVNTSRAGLI
EPGALVEALR AGRPGMAAID VFDAEPLRDP SDPLLKMDNV VATPHIGYVS RDEYELQFSE
IFDQIVAYAA GEPINVVNPA VTSHARR
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