| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4074 |
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| Symbol | |
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| ID | 4024591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4528593 |
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| End bp | 4529699 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637964277 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_571194 |
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| Protein GI | 91978535 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGCGC ACCCGATTTT CGATGGATTT ATCCGGTTGT TCATCGGCTT GCTGATCGCA
TTCGCGGCGA TCGGGCTGGC CGGCTGCAAC GACAAGCAGG TCAAGAAGGA GCGCTCTGAT
CGGCCCGTCC TGGTCGAGAC CGTGCATTAT ATCGCGGCCT CTCCCGAACG TAGTTTCGTC
GGAACGGTCC GGCCGCGGAT CGAGACCGAT ATCGGCTTCC GGGTCTCCGG AAAGGTCGCG
AAGCGCCTTG TCGAGGTCGG GCAGACCGTC GAGATCGACC AACCGCTGGC GCTGCTCGAC
CAGACCGATC TCAAACTGCA AACGGAACAA TCCGAGGCCG AGCACCGCGC CGCCAAGGGC
GTGCTGGCGC AGGCGACCGC GTCCGAGAAC CGCGTCAAGG AGCTTCGCGC CAAGGGTTGG
GCGACGGAAG CGCAAATGGA TCAGGCGCAC GCCGCGGCGG ATGAGGCCCG CGCCCGCTTC
GCCCGTGCCG AGCGTTCGGT GGACCTGACC CGCAACGCGC TGTCCTATGC GAGCCTGATT
GCCGATACCC GCGGCGTCAT CACCGCGACG CTGATCGATG CCGGCCAGGT GGTCTCGGCA
GGGCAGCCGG CGTTCCGCGT GGCGCGGTTC GGCGAGAAGG AGGCCGTGGT CGCGATTCCG
GAGACGCTGG TGGGTCGCGC CAAGCAGGGC GAGGCCCGCG TCACGCTGTG GTCCGAGCCC
GGCAAGACCT ACGCAGCGAA GCTGCGCGAG ATTGCGCCGA TGGCAGACCC GGCGACCCGC
ACCTACCTCG CCAAGTTCCT GTTGCCCGAT GCCGACGACC GCGTCTCGCT CGGCATGACC
GCGACATTGA CGCTTGCCGA TTCGGCGACG GATCGCGTGG CGCGGCTGCC CCTTGCAGCA
TTGTTCAATC AGGGCGGCGC GTCGTCGATC TACGTTGTCG ATGGGTCCGG TCGGGTGACG
CTGAAGCCGG TCACCGTGAA GGCCTACGAG ACCGATCATG TGGTGATCAG CGGCGGCGTC
GAGGAGGGCG CCAAGGTGGT CGTGCTCGGC GTGCAAAAGC TCGATCCGGC CGAGAGGGTC
CGGATCGTGT CATCGTTGTC GTTCTAG
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| Protein sequence | MLAHPIFDGF IRLFIGLLIA FAAIGLAGCN DKQVKKERSD RPVLVETVHY IAASPERSFV
GTVRPRIETD IGFRVSGKVA KRLVEVGQTV EIDQPLALLD QTDLKLQTEQ SEAEHRAAKG
VLAQATASEN RVKELRAKGW ATEAQMDQAH AAADEARARF ARAERSVDLT RNALSYASLI
ADTRGVITAT LIDAGQVVSA GQPAFRVARF GEKEAVVAIP ETLVGRAKQG EARVTLWSEP
GKTYAAKLRE IAPMADPATR TYLAKFLLPD ADDRVSLGMT ATLTLADSAT DRVARLPLAA
LFNQGGASSI YVVDGSGRVT LKPVTVKAYE TDHVVISGGV EEGAKVVVLG VQKLDPAERV
RIVSSLSF
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