| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4062 |
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| Symbol | |
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| ID | 4024579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4513704 |
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| End bp | 4515092 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637964265 |
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| Product | NADH:flavin oxidoreductase/NADH oxidase |
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| Protein accession | YP_571182 |
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| Protein GI | 91978523 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00355793 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.310254 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACGCC GCCGACCAAA CGGTCGGAAC GCACTTCCAT CTGCGGCATT CATCTGCAGC
GTCGAATTCC GTAACGAAAG ATCCCCCGCG CCCCGCGCAC CCGAATTGCG CGAAACGCTA
TTCCCTTTTC GGCTGGCCCT GCAGCAAGTC CAGAAGGTGC CGGGCGCAGT TTCGGGGACG
GCATTCCAAT ATTTCATGCA GTCGCATCTA TTTTGCGGCC GAACCATTGC CTTTCCCGCG
GCGAGCCCCA AGTTCCTCCC TATTCGCAAT CTTCCCGGGA ACGGCACAAT GACCAATTCC
AAACTCTTCG AGCCCTACCA GCTCGGCTCG ATCACGCTCT CCAACCGCAC GGCGATGGCG
CCGCTGACGC GCAATCGCGC GATTCCCGAG GGGCTGGTGC CCAATCCGCT CGCGGTGGAG
TATTATGGCC AACGCGCCGG CGCCGGGCTG CTGATCACCG AAGCGAGCCA GATCTCGCAG
CAGGGCCAAG GCTATCAGGA CACCCCCGGC ATCTATTCCA AGGAGCAGAT CGCGGCTTGG
CGCAAAGTCA CCGACGAGGT GCACAAGCGC GGCGGCAAGA TCTTCATCCA GCTCTGGCAC
GTCGGCCGCA TCTCTCATGT CGACCTGCAA CCGAACGGCG GCGCCCCGGT CGCGCCTTCG
GCGATCAAGG CCAACACCAA GACCTTCGTC GGCGGCAAGT TCGTGGATGT CTCCGAGCCC
CGCGCGCTGG AGTTGAATGA GATTCCCGGA ATCGTCGATG CGTTCCGCCA GGGCGCCGCC
AATGCTATCG CGGCCGGTTT CGACGGCGTC GAAATTCATG CCGCCAACGG CTATCTGCTC
GACCAGTTCG CCAAGGACGG CGCCAACAAA CGCACCGACG CCTATGGCGG ATCGATCGAG
AACCGCGCGA AGCTGATGCT CGAAGTCGCC AAGGCGGTGG CCGACGAGAT CGGCGCCGGC
CGCACCGGCA TCCGGCTGTC GCCGGTGACC CCGGCCAACG GCATCTCGGA CTCTGATCCG
CAGCCGCTGT TCGACTACAT CGTCGACCAG CTCAACGCGC TGAAGCTGGT CTACATCCAC
GTGATCGAGG GGGCGACCGG CGGCCCGCGC GACAACGCCC CGTTCGACTA TGCAAGCCTG
CGCAAGCGCT TCAGCGGCAC CTATATCGGC AACAACGGCT ACGACCTCGC GCTCGCCAAC
AAGGTACTCG ACGCCGGCGA GGCCGATCTG ATCGCATTCG GCACGCCGTT CATTTCGAAT
CCCGACCTCG TCGAGCGCCT GAAGAACGGC GCGCCCCTCA ATAAGCCGGA CAAGGCGACC
TTCTATGGCG GCGGCGCCAA GGGCTACACC GACTACCCGA CATTGGAGTC GCTACAGGCG
GCGCAATAA
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| Protein sequence | MPRRRPNGRN ALPSAAFICS VEFRNERSPA PRAPELRETL FPFRLALQQV QKVPGAVSGT
AFQYFMQSHL FCGRTIAFPA ASPKFLPIRN LPGNGTMTNS KLFEPYQLGS ITLSNRTAMA
PLTRNRAIPE GLVPNPLAVE YYGQRAGAGL LITEASQISQ QGQGYQDTPG IYSKEQIAAW
RKVTDEVHKR GGKIFIQLWH VGRISHVDLQ PNGGAPVAPS AIKANTKTFV GGKFVDVSEP
RALELNEIPG IVDAFRQGAA NAIAAGFDGV EIHAANGYLL DQFAKDGANK RTDAYGGSIE
NRAKLMLEVA KAVADEIGAG RTGIRLSPVT PANGISDSDP QPLFDYIVDQ LNALKLVYIH
VIEGATGGPR DNAPFDYASL RKRFSGTYIG NNGYDLALAN KVLDAGEADL IAFGTPFISN
PDLVERLKNG APLNKPDKAT FYGGGAKGYT DYPTLESLQA AQ
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