| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4057 |
|---|
| Symbol | |
|---|
| ID | 4024574 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 4509393 |
|---|
| End bp | 4510157 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637964260 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_571177 |
|---|
| Protein GI | 91978518 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0519536 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.153158 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCC TCGAAACCCA GGACCTCACC ATTCGCTTCG GCGGCCATGT CGCCGTCAAT
GCGGTGAGCT GCGCATTTCG GCCCGGCGAG CTGACCGCAA TCGTGGGGCC GAACGGCGCC
GGCAAGACGA CGTATTTCAA TCTGATCTCG GGTCAGTTGC GGCCGAGCGC CGGCCGCATC
CTGTTCGAGG GCGCGGACAT CACCCGGATG ACCGCGCCGC TGCGCACCCG CGCCGGGCTC
GGTCGCGCGT TCCAGCTCAC CAATCTGTTT CCAAATCTCA GCGTCGAGGA AAACGTCCGG
CTGGCGGTGC AGGCGCATAG CGGCGCGCAT TACGACATGC TGCGGCCGTG GCGGACGCGG
CGCGACCTGA TCGAACGCGC CGACGCGATC CTCGACAGCG TCGCGCTCGG CAGCCGGCGC
AACGCCGCCG CGACCGCGCT GTCGCACGGC GACCAGCGCA AGCTCGAAGT CGCGCTGATG
ATGGCGCTGG AGCCGAAGGT CTACATGTTT GACGAGCCGA CCGCAGGCAT GAGCGTCGAC
GAGGTGCCCG TGGTGCTCGA CCTGATCGCG CGGTTGAAGG CCGATCCGAG CAAGATCATC
CTGCTGGTCG AACACAAGAT GGACGTGGTG CGCTCGCTAG CCGACCGCAT CATCGTGCTG
CATAACGGCC AGCTCGTCGC CGATGGCAAG CCGGCCGAAG TGATCGCCTC GCCGATCGTG
CAGGAAGCCT ATCTCGGCAT CGCGCCGGGA AAGAGCGCCG CATGA
|
|---|
| Protein sequence | MTTLETQDLT IRFGGHVAVN AVSCAFRPGE LTAIVGPNGA GKTTYFNLIS GQLRPSAGRI
LFEGADITRM TAPLRTRAGL GRAFQLTNLF PNLSVEENVR LAVQAHSGAH YDMLRPWRTR
RDLIERADAI LDSVALGSRR NAAATALSHG DQRKLEVALM MALEPKVYMF DEPTAGMSVD
EVPVVLDLIA RLKADPSKII LLVEHKMDVV RSLADRIIVL HNGQLVADGK PAEVIASPIV
QEAYLGIAPG KSAA
|
|---|
| |