| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4056 |
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| Symbol | |
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| ID | 4024573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4508065 |
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| End bp | 4509249 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637964259 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_571176 |
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| Protein GI | 91978517 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.423392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.164952 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTCATC TTTCCATTGT TGCAGCCGCA GCCCTCACGC TGACCGCGAC GGTCGCCGCC
CGAGCCGACG ACCTCAAGAT CGCGCTGATC TACGGCAAGA CGGGACCGCT CGAAGCCTAC
GCCAAGCAGA CCGAAACCGG CCTGATGATG GGCCTCGAAT ACGCGACCAA GGGCACGATG
ACGCTCGACG GCCGCAAGAT CAAGGTGATC ACCAAGGACG ATCAGAGCAA GCCCGACCTC
TCCAAGGCCG CGCTCGCCGA AGCCTATCAG GATGACGGCG CCGACATCGC GATCGGCACC
TCGTCGTCGG CGGCGGCGCT GGCGGACCTG CCGGTCGCCG AAGAGAACAA GAAAATCCTG
ATCGTCGAGC CCGCGGTCGC CGACCAGATC ACCGGCGAGA AGTGGAATCG CTACATCTTC
CGCACCGGCC GCAATTCCTC GCAGGACGCG ATCTCCAACG CGGTCGCAAT CGGCAAGCAA
GGCGTCACCA TCGCCACGCT GGCGCAGGAC TACGCGTTCG GCCGCGACGG CGTCGCCGCC
TTCAAGGAGG CGCTGACCAA GACCGGCGCG ACGCTCGCCG CCGAGGAATA TGTTCCGACC
ACCACCACCG ACTTCACCGC GGTCGGGCAG CGGTTGTTCG ACACGCTGAA AGACAAGCCC
GGCAAGAAGA TCATCTGGGT GGTCTGGGCC GGCGGCGGCG ATCCCTTGAC CAAGCTGCAG
GACATGGACC CGAAGCGCTA CGGCATCGAA CTGTCCACCG GCGGCAACAT CCTGCCGGCA
CTCGCCGCCT ACAAGCGACT GCCCGGCATG GAAGGCGCGA CCTATTACTA TTACGACATC
CCGAAGAACC CGATCAACGA CTGGCTGGTG ACCGAGCATC AGAAGCGCTT CAACGCGCCG
CCGGATTTCT TCACCGCCGG CGGTTTCTCC GCGGCGATGG CGGTGGTCAC CGCCGTGCAG
AAGGCGAAAT CGACCGACAC CGAGAAGCTG ATCGCGGCGA TGGAAGGCAT GGAGTTCGAC
ACGCCGAAGG GCAAGATGAT GTTCCGCAAG GAAGACCATC AGGCGCTGCA GAGCATGTAT
CACTTCAAGG TCAAGGCCGA TCCGAACCTC GCCTGGGCCG TGCTCGAGCC GGTGCGGGAG
CTGAAGATCG AGGACATGAC GATCCCGATC AAGAACAAGC GGTAA
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| Protein sequence | MRHLSIVAAA ALTLTATVAA RADDLKIALI YGKTGPLEAY AKQTETGLMM GLEYATKGTM
TLDGRKIKVI TKDDQSKPDL SKAALAEAYQ DDGADIAIGT SSSAAALADL PVAEENKKIL
IVEPAVADQI TGEKWNRYIF RTGRNSSQDA ISNAVAIGKQ GVTIATLAQD YAFGRDGVAA
FKEALTKTGA TLAAEEYVPT TTTDFTAVGQ RLFDTLKDKP GKKIIWVVWA GGGDPLTKLQ
DMDPKRYGIE LSTGGNILPA LAAYKRLPGM EGATYYYYDI PKNPINDWLV TEHQKRFNAP
PDFFTAGGFS AAMAVVTAVQ KAKSTDTEKL IAAMEGMEFD TPKGKMMFRK EDHQALQSMY
HFKVKADPNL AWAVLEPVRE LKIEDMTIPI KNKR
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