| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4035 |
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| Symbol | |
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| ID | 4024552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4484618 |
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| End bp | 4486003 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637964238 |
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| Product | peptidase M16-like |
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| Protein accession | YP_571155 |
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| Protein GI | 91978496 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.291122 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATGT CCATTGCTCG CCCGCGCGCC GCGCTCGCCG TTCTCGCCGC CACCCTCTGC
CTTGCGGGTC CCGCGGCGGC GCAAAGCGTC ACCGCCGATC CGCCCGCCAC CTTCACGCTC
GGCAACGGGC TGAACGTGGT GGTGATCCCG GATCATCGCA CCCCGGTGGT GACGCAGATG
ATCTGGTACA AGGTCGGCTC CGCTGACGAG ACGCCCGGCA AGTCCGGACT CGCGCATTTC
CTCGAGCATC TGATGTTCAA GGGCACCGCC AAGCACCCGG CCGGCGAGTT CTCGCAGACG
GTGCTGAAGA TCGGCGGCAA CGAGAACGCA TTCACTTCGG TCGACTACAC CGGCTATTTC
CAGCGCGTGC CGCGCGAACA TCTCGACCGG ATGATGGAGC TCGAGGCCGA TCGGATGACC
GATCTGGTGC TGAAGGACGA GAACGTGCTG CCGGAGCGCG ACGTCGTCCT CGAAGAATAC
AACATGCGGG TCGCCAACAA TCCCGACGCG CGGCTGACCG AGCAGATCAT GGCGGCGCTG
TATCTCAACC ACCCCTATGG CCGCCCGGTG ATCGGCTGGC ACCAGGAAAT CCAGAAGCTC
GACCGCGAGG ATGCGCTGGC GTTCTATCGC CGCTTCTACG CGCCGAACAA CGCCACCCTG
GTGATTGCCG GCGACGTCGA TGCCGCGCAG ATCCGGCCGG CGATCGAGCG CACGTACGGC
GCGATCCCGC CGCAGCCGGC GATCGCGGCG CAGCGCGTGC GCCCGCAGGA GCCGACCTCC
GCCGGGCCGC GCACGGTGAC GCTGGCCGAT CCGCGGGTCG AGCAGCCGAG CGTGCGGCGC
TATTATCTGG CGCCGTCGGC GGTCACCGCC GCCAAGGGCG ACAGCCCCGC GCTCGAAGTG
CTGGCGCAGC TGATGGGTGG TGGCAGCAAC TCCTATCTCT ACCGCGCGCT GGTGATCGAC
CGTCCGCTCG CGATCAGCGT CGGCGCCAAC TATCAAGGCA CCGCGCTCGA CGACAGCCAA
TTCGTGATCG CGGCGACGCC GAGGCCGGGC GTCGAGTTCT CCGAGATCGA GAAGGGGATC
GACAACGTGA TCGCCGAACT CGTCCGCAAT CCGGTCCGCT CCGAGGACCT CGAGCGGGTG
AAGACGCAAC TGATCGCCGA GGCGATCTAT GCGCAGGACA ATCAGGTGAC GCTGGCGCGC
TGGTACGGCG CGGCGCTGAC CTCCGGTCTC AGCGTGCAGG ACATCCAGAC CTGGCCGGAT
CGCATCCGCG CCGTCACCTC GGACCAGGTC CGCGCCGTGG CGCAGCAGTT CCTCGACCGC
AACCGCTCGG TCACCGGCTA TCTGGTCAAG GGCACGTTGC CGAAGCCCGA GGAGAAGCGC
TCGTGA
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| Protein sequence | MTMSIARPRA ALAVLAATLC LAGPAAAQSV TADPPATFTL GNGLNVVVIP DHRTPVVTQM
IWYKVGSADE TPGKSGLAHF LEHLMFKGTA KHPAGEFSQT VLKIGGNENA FTSVDYTGYF
QRVPREHLDR MMELEADRMT DLVLKDENVL PERDVVLEEY NMRVANNPDA RLTEQIMAAL
YLNHPYGRPV IGWHQEIQKL DREDALAFYR RFYAPNNATL VIAGDVDAAQ IRPAIERTYG
AIPPQPAIAA QRVRPQEPTS AGPRTVTLAD PRVEQPSVRR YYLAPSAVTA AKGDSPALEV
LAQLMGGGSN SYLYRALVID RPLAISVGAN YQGTALDDSQ FVIAATPRPG VEFSEIEKGI
DNVIAELVRN PVRSEDLERV KTQLIAEAIY AQDNQVTLAR WYGAALTSGL SVQDIQTWPD
RIRAVTSDQV RAVAQQFLDR NRSVTGYLVK GTLPKPEEKR S
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