| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4030 |
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| Symbol | ispH |
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| ID | 4024547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4478502 |
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| End bp | 4479467 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637964233 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_571150 |
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| Protein GI | 91978491 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.953611 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGGCCA AACCGCCTCT GAAGATCGTC CTCTGCTCGC CGCGCGGGTT CTGCGCCGGC
GTGGTGCGGG CAATCGACAC CGTCGAGCGT GCGCTGACGC TGTATGGCGC TCCGGTCTAT
GTCCGGCACG AAATCGTCCA TAACAAATAC GTGGTCGACA ACCTCCGCGC CAAGGGCGCG
ATTTTCGTCG AGGAACTCGG GGAAATCCCG GACACCAAGG CGCCGGTTGT CTTCTCCGCC
CACGGCGTTC CGAAGTCGGT CCCCGAGGAC GCGACGGCGA GGAATTTCTT CTCGGTCGAC
GCCACCTGCC CGCTGGTCAC CAAGGTGCAT CGCGAGGCGG CGATCCATTT CAAGCGCGGT
CGCGAGATTC TGCTGATCGG CCATTCCCAT CATCCGGAAG TGGTCGGCAC GCTCGGCCAG
CTGCCGGTCG GCGCGGTCAC CCTGATCGAG ACCGCCGCCG ATGCTTCGAG CTTCACCCCG
AAGAACCCGG ACAACCTCGC TTTCGTGACG CAGACCACGC TGTCGATCGA CGACACCGCC
GGAATCGTCG CGGTGCTGCG CCAGCGCTTC CCGAACATTT CCGGGCCGCA CAAGGAAGAC
ATCTGCTACG CCACCACCAA CCGTCAGGCG GCGGTGAAGA AGGTGGCGCC GGTGGTCGAC
GCGATGATCG TGGTCGGCGC GCCGAATTCC TCGAATTCGC AGCGTCTGCG CGAGGTCGCC
GAGCGCGAAG GCTGCCGGGT CGCGGTGCTG GCGCAGCGCG CCTCCGACAT CGACTGGTCG
CTGTTCGAGG GCATCTCCAG CCTCGGCCTC ACGGCCGGCG CCTCGGCCCC CGAGGTGATC
GTCGAGGAGA TCATGGGCGC CTTCGCCGAG CGCTTCGACC TCAGCGTCGA AACGGTATCG
GCTGCGGAAG AGAACGAGTT TTTCCCGCTC CCCCGCGTGC TCCGCCCCGA CGCGGCTGCG
GAGTAG
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| Protein sequence | MLAKPPLKIV LCSPRGFCAG VVRAIDTVER ALTLYGAPVY VRHEIVHNKY VVDNLRAKGA
IFVEELGEIP DTKAPVVFSA HGVPKSVPED ATARNFFSVD ATCPLVTKVH REAAIHFKRG
REILLIGHSH HPEVVGTLGQ LPVGAVTLIE TAADASSFTP KNPDNLAFVT QTTLSIDDTA
GIVAVLRQRF PNISGPHKED ICYATTNRQA AVKKVAPVVD AMIVVGAPNS SNSQRLREVA
EREGCRVAVL AQRASDIDWS LFEGISSLGL TAGASAPEVI VEEIMGAFAE RFDLSVETVS
AAEENEFFPL PRVLRPDAAA E
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