Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_4026 |
Symbol | |
ID | 4024543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 4474571 |
End bp | 4476244 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637964229 |
Product | ABC transporter related |
Protein accession | YP_571146 |
Protein GI | 91978487 |
COG category | [R] General function prediction only |
COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACA ACGTCCTCGA GATCGACAAT CTGATCGTCC GGCTCGGCAG GTCCGGCGGT GGCGACAAGG TGATCGACGG CATCTCGCTG TCGGTGCGCC CCGGCGAAAC CATGTGCCTG GTCGGCGAGA GCGGCTCCGG CAAATCGGTG ACCTCGCTCG CCACCATGGG GTTGCTGCCG AAAGGCGCGT TGCACGCGAC CGGCGGCCAG ATCCGGCTCG CCGGCGAGAA TGTGCTCGCC GCCAGCGAAC GGCGGCTGCG GCAACTCCGC GCCAGCCAGA TGGCGATGAT CTTCCAGGAG CCGATGACGG CGCTCAACCC GGTGGTGCCG GTCGGCAAAC AGATCGACGA AGTGCTGCGC TTTCACACCG ATCTCGGCGC GCGCGAGCGC CGCCGGCGCA TCCTCGACAT GATGCAGCAG GTCCGACTGC CGGAAATCGA GCGCATCTTC GCGTCCTATC CGCACCGCCT CTCCGGCGGA CAACGCCAGC GCATCATGAT CGCGATGGCG CTGGTGCTGG AGCCGAAGCT GCTGATCGCC GACGAGCCCA CCACCGCGCT CGACGTGACC ACCCAGAAGC AGATCCTGAC GCTGATCCGC GATTTGCAAC AGGCGCACGG CACGGCGGTG CTGTTCATCA CCCACGACAT GGGCGTGGTC GCCGAGATCG CCGACCGGGT CGCGGTGATG CGCACGGGCC GCCTGGTCGA GACCGGGCCG CTCGACGATG TGCTGCGCAA GCCCGCGATG GACTACACCC GCAAACTCCT GTCCGCGGTG CCGAGCCTGG TGCCGCGGCC GCCGCGCGAA AACAAGGCGC TGCCGGTGGT GCTGGAGGCC AACGAACTCG GAAAGGTGTA CCGCGAGCGC TCCTTGTTCG GCCGCAATCG CGAGGTGGTC GCCGCGCAGG ACGTGACGCT GACGCTGCAC AAGGGCCGCA CGCTCGGGAT CGTCGGCGAA AGCGGCTCCG GCAAATCGAC CGTGGCGCGC TGCATCGTGC GGCTGATCGA TCCGACCTCG GGCGGCATCC GCCTCGCCGG CCGGGAAATC TCCGACCTGT CGCGGCGGCG GCTGCGGCCG CACCGCAAGC GCATCCAGAT CATTTTCCAG GACCCGTATC GATCGCTCAA CCCGCGCGTC AGCATCGGCG AGAGCATCGC CGAGGGCCCG ATCAATTACG GCATGCCGCG GGAGCAGGCG CTGGAGAAAG CGCGGCAACT GCTCGAACTG GTGCATCTGC CGGCGGATGC GATCTCGCGG TACCCACATC AGTTCTCCGG CGGCCAGCGC CAGCGCATCG CGATTGCCCG CGCGCTGGCG CTCGATCCCG ACGTGCTGGT CGCCGACGAG GCGGTGTCGG CGCTCGACGT CTCGGTGCAG GCGCAGGTGC TGGAGCTGCT CGACGAAATC CAGACGAGAC TCGGCATCGC GCTGCTGTTC ATCACCCACG ATCTGCGCGT CGCCGCGCAG ATCTGCGACG AGGTCGTCGT GATGGAAAAA GGCCGCGTCG TCGAGCAGGG TCCGGCAGGC GACGTGCTCA CTCATCCGAA GCAGGCCTAT ACGCGGCAGT TGCTCGAAGC CGCGCCCGGG CGAGACTGGG ACTTCGCGAA TTTCCGGCCG GTCGGCGAAG CGCCGCCGCT TCCGACGAAT TGCCCCGCCG CCCCCGGCCT GTAA
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Protein sequence | MTDNVLEIDN LIVRLGRSGG GDKVIDGISL SVRPGETMCL VGESGSGKSV TSLATMGLLP KGALHATGGQ IRLAGENVLA ASERRLRQLR ASQMAMIFQE PMTALNPVVP VGKQIDEVLR FHTDLGARER RRRILDMMQQ VRLPEIERIF ASYPHRLSGG QRQRIMIAMA LVLEPKLLIA DEPTTALDVT TQKQILTLIR DLQQAHGTAV LFITHDMGVV AEIADRVAVM RTGRLVETGP LDDVLRKPAM DYTRKLLSAV PSLVPRPPRE NKALPVVLEA NELGKVYRER SLFGRNREVV AAQDVTLTLH KGRTLGIVGE SGSGKSTVAR CIVRLIDPTS GGIRLAGREI SDLSRRRLRP HRKRIQIIFQ DPYRSLNPRV SIGESIAEGP INYGMPREQA LEKARQLLEL VHLPADAISR YPHQFSGGQR QRIAIARALA LDPDVLVADE AVSALDVSVQ AQVLELLDEI QTRLGIALLF ITHDLRVAAQ ICDEVVVMEK GRVVEQGPAG DVLTHPKQAY TRQLLEAAPG RDWDFANFRP VGEAPPLPTN CPAAPGL
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