| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4024 |
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| Symbol | |
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| ID | 4024541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4472731 |
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| End bp | 4473672 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637964227 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_571144 |
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| Protein GI | 91978485 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.932563 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGGCT ATCTGATCCG CCGCATCCTC GCGGCTGTTC CGGTGATGGG CGTCGTCGCG
CTCGTCGTCT TCCTGCTGCT CCGGCTGACG CCGGGCGATC CGGCTGCAAT CCTCGCCGGC
GACAATGCCT CCCCCGAACA ACTCGCGCGC ATCCGGGAAA CGCTCGGCCT CAACGAGCCG
CTCTATACCC AGTTCTTCAG CTGGGTCGGC AAGCTGCTCC AGGGCGACCT CGGCGTCTCG
CTGATCTCGC AGGTGCCGGT GCTGCAGATG ATCAGCCAGC GGATCGAGCC GACGCTGAGC
ATCGCGATCT CCACCATCGT CCTCTCGATC ATCGTCGCGG TGCCGCTCGG CGTGATCGCC
GCGTGGAGGC ACGGCACCTG GATCGATCGC TTCGTGATGG GGCTGTCGGT GATCGGCTTC
TCGGTGCCGG TGTTCGTGAT CGGCTATATG CTGATCCAGA TCTTCGCGAT CGAACTGCGC
TGGTTTCCGG TGCAGGGCTT CCGCCCGCTG GCGCGCGGCT TCGGCCCGTA TTTCGAGCGG
CTGGTGCTGC CGACATTGAC GCTGTCCTTC ATCTACATCG CGCTGATCGC GCGGATGACC
CGCGCGGCGA TGCTCGACGT GCTCGGCGAG GATTATGTCC GCACCGCGCG CGCCAAGGGC
ATCACCGAAA CCCGCGTGCT GCTGCGCCAC GCGCTGCGCA ACGCCGCGGT GCCGGTGATC
ACCGTGATCG GCACCGGCTT CGCGTTGCTG ATCTCCGGCG TGGTCGTCAC CGAAAGCGTG
TTCAATTTGC CGGGCATCGG GCGGCTCACC GTCGATGCGG TGCTGGCGCG GGACTATCCG
GTGATCCAGG GCATGATCTT GCTGACCTCG GGCATCTATG TCGCCGTCAA TCTGCTGATC
GACGTGGCCT ACACGCTGCT CGATCCGCGG ATCAGGTATT AG
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| Protein sequence | MLGYLIRRIL AAVPVMGVVA LVVFLLLRLT PGDPAAILAG DNASPEQLAR IRETLGLNEP
LYTQFFSWVG KLLQGDLGVS LISQVPVLQM ISQRIEPTLS IAISTIVLSI IVAVPLGVIA
AWRHGTWIDR FVMGLSVIGF SVPVFVIGYM LIQIFAIELR WFPVQGFRPL ARGFGPYFER
LVLPTLTLSF IYIALIARMT RAAMLDVLGE DYVRTARAKG ITETRVLLRH ALRNAAVPVI
TVIGTGFALL ISGVVVTESV FNLPGIGRLT VDAVLARDYP VIQGMILLTS GIYVAVNLLI
DVAYTLLDPR IRY
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