| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4022 |
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| Symbol | |
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| ID | 4024539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4469508 |
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| End bp | 4471118 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637964225 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_571142 |
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| Protein GI | 91978483 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00714098 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCACA CGTCGCATTG GCTGCGTTCA GTAGCTGTGT CGAAATTCGC AGTGCCGGCG
CTGGCGCTCG CAGCTTCGCT GACGCTCCCT GCGTTTGCTG ATGCCAAGAC CATTCATGCG
GTGATGCATT CCGATCTGCG CGTGACCGAT CCCGGACTGA CCACCGCCTA CATCACCCGC
GATCATGGCT ACATGGTCTA TGATACGCTG CTCGCGATGG ACTCGAACTT CAAGGTCCAG
CCGCAGATGG CGGAGTGGAA GGTCTCCGAG GACAAACTGA CCTACACCTT CACGCTGCGC
GACGGCCTGA AGTGGCACGA TGGCGCTCCG GTCACCGCCG AGGATTGCGT CGCCTCGCTG
AAGCGCTGGG GCCAGAAAGA CGGCATGGGC CAGAAGCTGA TGGACTTCAC GGCGAGCCTC
GAGGCCACCG ATGCGAAGAC TATCACGCTG AAGTTGAAGG AGCCCTACGG GCTGGTGCTG
GAGTCGATCG GCAAGCCATC GTCGCTGGTG CCGTTCATGA TGCCGAAGCG GATCGCCGAG
ACGCCGCCGG ACAAGGCGAT CCCCGAGCAG ATCGGCTCCG GTCCGTTCAA ATTCGTCGCC
GCGGAATTTC AGCCGGGCGT CAAGGCGGTT TACGTCAAGA ACGCCGACTA CGTGCCGCGC
AAGGAGGCGC CGAGCTGGAC GTCGGGCGGC AAGGTGGTGA AGGTCGACCG GGTCGAATGG
ATCACCATGC CCGACGCGCA GACCGCGGTG AACGCGCTGC AATCCGGCGA CATCGATTTC
ATCGAGAATC CGTCCTTCGA CATCCTGCCC GTTCTGAAGC AGGACAAGGA ATTGACGATC
CACACGCTGA GCCCGCTCGG CTTTCAGACG CTCGGCCGGA TGAACTTCCT GTATCCGCCG
TTCGATAACG TCAAGGTTCG CCGCGCCGCG TTTCTGGCGA TGAGCCAGAA GCCGGTGCTC
GATGCGCTGG TCGGCAACCC GCAATACTAC AAGGTCTGCG GCGCCGTGTT CGGCTGCGGC
ACGCCGCTGG CGTCGGACGT CGGCTCCGAG ACGTTGGTCA AGGGCAGCGG CATGGCGGAG
GCCAAGAAGC TGCTCGCCGA GTCCGGCTAT GACGGCACGC CGATCGCGCT GATGGCGCCG
GGCGACGTCG TCACCCTGAA GGCGCAGCCG ATCGTGGCGG CGCAGCTGTT GCGCGAGGCC
GGTTTCAAGG TCGACGTCCA GGCCACCGAC TGGCAGACCG TGGTGACGCG GCGCGCCAGC
CAGAAACCGC CGAAGGACGG CGGCTGGAAC ATGTTCTTCA CCAATTGGGC GGGTCCGGAC
ATTCTCAATC CGGTCGCCAA TGTTTCGACC GGGGGCAAGG GCAAGAACGG CGGCTGGTTC
GGCTGGGCGG AGGACGCCAG GGTTGAAGAG CTGCGCGACA AATTCGCCCG CGCGACCTCG
CCCGACGAGC AGAAGAAGCT CGCCGAGGAG ATCCAGAAAG AAGTCTACGA CAAGGTGATC
TATATTCCGC TCGGCCAGTA CACAGCGCCC AGCGTATGGC GCAACGAACT GACCGGCGTG
CTCGACGGCC CGGCGACGCC GGTGTTCTGG AATATCGACA AGAAGGAATA G
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| Protein sequence | MFHTSHWLRS VAVSKFAVPA LALAASLTLP AFADAKTIHA VMHSDLRVTD PGLTTAYITR
DHGYMVYDTL LAMDSNFKVQ PQMAEWKVSE DKLTYTFTLR DGLKWHDGAP VTAEDCVASL
KRWGQKDGMG QKLMDFTASL EATDAKTITL KLKEPYGLVL ESIGKPSSLV PFMMPKRIAE
TPPDKAIPEQ IGSGPFKFVA AEFQPGVKAV YVKNADYVPR KEAPSWTSGG KVVKVDRVEW
ITMPDAQTAV NALQSGDIDF IENPSFDILP VLKQDKELTI HTLSPLGFQT LGRMNFLYPP
FDNVKVRRAA FLAMSQKPVL DALVGNPQYY KVCGAVFGCG TPLASDVGSE TLVKGSGMAE
AKKLLAESGY DGTPIALMAP GDVVTLKAQP IVAAQLLREA GFKVDVQATD WQTVVTRRAS
QKPPKDGGWN MFFTNWAGPD ILNPVANVST GGKGKNGGWF GWAEDARVEE LRDKFARATS
PDEQKKLAEE IQKEVYDKVI YIPLGQYTAP SVWRNELTGV LDGPATPVFW NIDKKE
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