| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4012 |
|---|
| Symbol | |
|---|
| ID | 4024529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 4457758 |
|---|
| End bp | 4458705 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637964215 |
|---|
| Product | pyruvate ferredoxin/flavodoxin oxidoreductase |
|---|
| Protein accession | YP_571132 |
|---|
| Protein GI | 91978473 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
|---|
| TIGRFAM ID | [TIGR03334] indolepyruvate ferredoxin oxidoreductase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAGC AGAGCAAGGT CACCGCCCTC AACGCGGACA GCGAGCCGGT CGCCTTCAAC
GCGGCGCTGG CCGAGCCCAC CAACGTGCTG ATCGTCGGCG TCGGCGGCCA GGGCGTGATC
ATGGTCTCGA AGGTGCTGGC GTCGCTGGCG CAGGCGCACG GCTTCGAGGT CAAGCAGAGC
GAAGTTCACG GCATGGCGAA GCGCGGCGGC GCGGTGTTCA GCCACGTCCG CTTCGGTCAA
CGGGTGTGGT CGCCGACCAT CGCCAAGGGT GAAGCCGACG TGCTGATCGC GCTGGAATGG
GCCGAGGGCC TGCGCTGGCT GCCGCATCTG AAGCGCGACA CCGGCGTGTT CATCTGCGAC
ACCAAGCGGA TCGTGCCGCC CTTCGCCTGC CTCAACCGCC GCCTCGGCGC GCCGTTGCGC
TATTCGACCG AGACCGCCGA ACAGGTGTCG GCCTATGTCT CCGAAGCCTA TGCGATCGAC
GCGACGCGGA TGGCGGAAGA CCTCGGCAAC GAACGCGCCG CCAATGTCGT GCTGCTCGGG
GCGCTGTCGA CGGTGCTCGA ATTCTCGCTG CCGGAGTGGG AGAAGACTGT CACCAGCTTC
GTGCCGAAAA AGACCATCGC GGTGAACACC GCGGCGTTCG AACTCGGCCG CAACTGGATT
TCGGAGGCGA AGAGCCCGCC GCCCGCCGCC GACGAAGCCG CTAGGCCTGC CTCGACGCAC
GCGCATTATT CGGCGCGGCT CGAGATCACC GACGCCTGGT GCAAGAGCTG CGAGATCTGC
GTCAAGCTCT GCCCCGAGCG CTGTCTCACG CTCAACGCCG AACGCATCGT CGAAATGACC
GCGCCGGAGA AATGCACCGG ATGCCGGCTG TGTGAATGGC TCTGTCCGGA TTTCGCCATC
CGCGTCCATC TGGATGCCGA GCAGCCCGCG ATGGAGGCGG TGCGATGA
|
|---|
| Protein sequence | MNEQSKVTAL NADSEPVAFN AALAEPTNVL IVGVGGQGVI MVSKVLASLA QAHGFEVKQS
EVHGMAKRGG AVFSHVRFGQ RVWSPTIAKG EADVLIALEW AEGLRWLPHL KRDTGVFICD
TKRIVPPFAC LNRRLGAPLR YSTETAEQVS AYVSEAYAID ATRMAEDLGN ERAANVVLLG
ALSTVLEFSL PEWEKTVTSF VPKKTIAVNT AAFELGRNWI SEAKSPPPAA DEAARPASTH
AHYSARLEIT DAWCKSCEIC VKLCPERCLT LNAERIVEMT APEKCTGCRL CEWLCPDFAI
RVHLDAEQPA MEAVR
|
|---|
| |