Gene RPD_4005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4005 
Symbol 
ID4024522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4450438 
End bp4451286 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content65% 
IMG OID637964208 
Productenoyl-CoA hydratase 
Protein accessionYP_571125 
Protein GI91978466 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0939626 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA TCGAGACCAT CCTGGTCGAG CGTCCCGATC CCGCCGTCGC GCGGATCGTG 
ATGAACCGGC CGGAGGCGCG CAACGCACAG AATCTGCAAA TGACCTACGA CCTCAACGCC
GCGTTCGACG ACGCGGTGCA GGACGACAGC GTCAAGGTCA TCATCCTGGC CGGCAACGGC
CCGCATTTCT CCGCCGGGCA CGATCTGCGC GCCACCAGCA AGAACGAAGC CGGCATCGAC
TTTCCGCCGA TCGGCAACTG GGGCGGCTTT CGCGAGCCGG GCGCGCATGG GCGGATGGCG
CGCGAGCAGG AAATCTATCT GCAGATCACC CGGCGCTGGC GCAACCTCGC CAAGCCGACC
ATCGCCGAGG TGCACGGCAA ATGCATTGCC GGCGGGCTGA TGCTGGCCTG GGCCTGCGAC
CTGATCGTCG CCGCCGACAG CGCCGAATTC TGCGACCCGG TGGTGACGAT GGGCGTGTGC
GGCGTCGAAT GGTTCGTGCA TCCGTGGGAA CTCGGTCCGC GCAAGGCCAA GGAGCTGCTG
TTCACCGCCG ACAGCTGGAG CGCGCAAGAC GGCTATCAGC TCGGCATGGT CAATCATGTG
GTGCCGGCCG CCGAACTATC CGCCTTCACC CTGGCGCTCG CCCAGCGCAT CGCCGCCAAG
CCGAGTTTTG CGCTGAAGAT GACCAAGGAG GCGGTCAACC GCTCGGTCGA CATCCAGGGC
CAGCCGGCCG CGATCGACCA GGCGTTCGCG CTGCATCAAC TTTGTCACGC TCACAATCTG
CAGGAGTTTG GAATGATCGT CGATCCGTCG GGACTGCATC CGTCGGTACG CAAACAGGTG
AAGGTGTAA
 
Protein sequence
MSAIETILVE RPDPAVARIV MNRPEARNAQ NLQMTYDLNA AFDDAVQDDS VKVIILAGNG 
PHFSAGHDLR ATSKNEAGID FPPIGNWGGF REPGAHGRMA REQEIYLQIT RRWRNLAKPT
IAEVHGKCIA GGLMLAWACD LIVAADSAEF CDPVVTMGVC GVEWFVHPWE LGPRKAKELL
FTADSWSAQD GYQLGMVNHV VPAAELSAFT LALAQRIAAK PSFALKMTKE AVNRSVDIQG
QPAAIDQAFA LHQLCHAHNL QEFGMIVDPS GLHPSVRKQV KV