| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4002 |
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| Symbol | |
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| ID | 4024519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4447948 |
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| End bp | 4448826 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637964205 |
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| Product | TonB-like |
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| Protein accession | YP_571122 |
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| Protein GI | 91978463 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCGT TCGCGTTGCA CGAGCCGGCG GGCAAAGGCC GCGCCTCGCA ATGGACGTTG
TCAGCGGCGG CGATCGTCGC CGCGCATCTC GGGCTGATCG TCGCGGCGGT CGCCTGGTAT
CAGCAGACAT CGCCGCCGGG GGTCGAGATT CCGGCGATCA TGGTCGACAT GGCGCCTGCG
CCCGCCGCGC CTGCGGTGCA GCCTCACGAC CTCGCGCCGG GTCCGCAGAT GCAGGAGGCG
CACGCCGCGC CTGAAGCGCT CAAGCAAGAC GGGTCGACGC GTGAGCTGTC GCCGCCGGAG
CCGATCAAGC CGGTCGCCGT GCAACAGACC GAACCGGTCC CGGTCGCGCC GACGCCTGAC
GTCGTGGCGC CGACGCCGGC CAGGGAGCCG CCGAAACCGG AAGTGGCCAA GCCGGAGCTG
AAGAAGGCCG AGCGGGTGAA ACGCGAAGAG GCGAAACGCA AGCCGGAGCG GGTCGAGCCG
AAACCGGTGT CGCGCGAGCC GCCGGCGCCG CGCACCACGG CCGCGCCGAA GGCCGATCGC
CAGGCCTCCC TGCAGTCGTC GCCGAATGCC GGCCGCGCCG CGGCTGCCGC GGCGCTACCG
CCCTATCGCG ACCAGCTCGC CGCCCATCTG GCGCGCTTCA AGCAATATCC CTCGTCGTCG
AAGGCCGCGG GCGAGCAGGG CACCGCGATG CTGAGCTTCA CGGTCGGTCG CGGCGGCCAG
GTGCTCGGCA GCCGGCTGAC GCGCTCGTCG GGCCATGCCG CGCTCGACGC CGAGACCCTG
GCGATGGTCC GCCGCGCCCA GCCGCTGCCG TCGTTCCCGC CGGAGATGAC GCAGTCCTCG
CTCGGCTTCA CCGTCCCGGT GAATTTCTCG CTGCGCTGA
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| Protein sequence | MNAFALHEPA GKGRASQWTL SAAAIVAAHL GLIVAAVAWY QQTSPPGVEI PAIMVDMAPA
PAAPAVQPHD LAPGPQMQEA HAAPEALKQD GSTRELSPPE PIKPVAVQQT EPVPVAPTPD
VVAPTPAREP PKPEVAKPEL KKAERVKREE AKRKPERVEP KPVSREPPAP RTTAAPKADR
QASLQSSPNA GRAAAAAALP PYRDQLAAHL ARFKQYPSSS KAAGEQGTAM LSFTVGRGGQ
VLGSRLTRSS GHAALDAETL AMVRRAQPLP SFPPEMTQSS LGFTVPVNFS LR
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