| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4001 |
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| Symbol | |
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| ID | 4024518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4447066 |
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| End bp | 4447770 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637964204 |
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| Product | 50S ribosomal protein L25/general stress protein Ctc |
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| Protein accession | YP_571121 |
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| Protein GI | 91978462 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
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| TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACCG TCATGGAATT GAAGGCGACC GCGCGTCCGA AGAGCGGCAA GGGGGCCGCC
CGGGCAGAGC GTCGCGCCGG CCGAGTGCCC GGAGTGATCT ACGGAGACAA CCAGCCCCCG
CTGCCGATTT CGGTCGAAGA CAAGGAATTG CGCCTGCGCA TCCTGGCCGG CCGGTTCCTG
ACCACGGTTT TCGACGTCGT CCTCGACGGC AAGAAGCACC GCGTCATTCC GCGCGACTAT
CACCTCGACC CGGTCAAGGA TTTCCCGATC CATGTCGACT TCCTGCGGCT CGGCGCGGGC
GCGACCATCC GCGTCAGCGT TCCGCTGCAT CTGAAGGGTC TGGAAAGCGC GCCGGGCGTG
AAGCGTGGCG GCACTTTCAA CATCGTCACC CACACCGTCG ACCTCGAAGC CCCGGCCGAG
AGCATTCCGC AGTTCATCGA AGCCGACGTG TCGACGCTGG ACATCGGCGT GTCGCTGCAT
CTGTCGGACA TCGCACTGCC GAACGGCGTG AAGTCGGTGT CGCGTGAAGA CGTCACGCTG
GTCACCATCG TGCCGCCGTC GGGCTTCAAT GAAGAGCAGA AGGCGGCTGC GGCCGGCGCT
GCGGCTCCTG CCGCCGCTGC GGCTCCTGCG GCCAAGGCTG GCGCCGCCAA GGCTCCGGCG
GCTGCGGCCA AGGCCCCGGC GGCTCCGGCG GCCAAGAAGA AGTAA
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| Protein sequence | MATVMELKAT ARPKSGKGAA RAERRAGRVP GVIYGDNQPP LPISVEDKEL RLRILAGRFL
TTVFDVVLDG KKHRVIPRDY HLDPVKDFPI HVDFLRLGAG ATIRVSVPLH LKGLESAPGV
KRGGTFNIVT HTVDLEAPAE SIPQFIEADV STLDIGVSLH LSDIALPNGV KSVSREDVTL
VTIVPPSGFN EEQKAAAAGA AAPAAAAAPA AKAGAAKAPA AAAKAPAAPA AKKK
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