| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4000 |
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| Symbol | |
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| ID | 4024517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4446424 |
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| End bp | 4447047 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637964203 |
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| Product | peptidyl-tRNA hydrolase |
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| Protein accession | YP_571120 |
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| Protein GI | 91978461 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0193] Peptidyl-tRNA hydrolase |
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| TIGRFAM ID | [TIGR00447] peptidyl-tRNA hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCTTGT TTGTTGGGTT GGGCAATCCC GGGTCGAAGT ACCAGGACAA CCGGCACAAC
ATCGGGTTCA TGGTCATCGA CGAGATCGCA CGGCGTCATG GCTTCTCGCC ATGGCGCCGT
CGCTTTCAGG GCGAGACCGC CGACGGCTCG CTGGACGGCG AGCGGATCAC GCTGTTGAAG
CCGCTCACCT ACATGAACGA GTCCGGTCGC GCCGTGCAGG AAGCCGTGAG CTTCTACAAG
ATCGGGCACG GTGAGGTCGC GGTGTTTCAC GACGAGATCG AACTGCCGCC GGCGAAGCTG
CGGGTCAAGG TCGGCGGCGG CATCGCCGGG CACAACGGCC TGCGCTCGAT CTCGGCGCAT
ATCGGCAACG ACTATCTGCG GGTGCGGCTC GGCGTCGGCC ATCCGGGCGT CAAGGAACTG
GTGCACGGCC ATGTACTCGG CGACTTCGCC AAAAGCGAGC GGCCATGGGT CGCGGCGCTG
GCCGAAGCCG TCGCGGACAA TGCCGGGCTG ATCGCGAAGG GCCGCGAGGC GACCTTCGCC
AACAAGGTAC ATCTGGCGCT ACAGGCCAGG GGATTTTTGG ACGACGACAA CAAGAAGTCT
GGCGCCGACA AGGCCGCCAA GTAA
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| Protein sequence | MRLFVGLGNP GSKYQDNRHN IGFMVIDEIA RRHGFSPWRR RFQGETADGS LDGERITLLK
PLTYMNESGR AVQEAVSFYK IGHGEVAVFH DEIELPPAKL RVKVGGGIAG HNGLRSISAH
IGNDYLRVRL GVGHPGVKEL VHGHVLGDFA KSERPWVAAL AEAVADNAGL IAKGREATFA
NKVHLALQAR GFLDDDNKKS GADKAAK
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