Gene RPD_3993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3993 
Symbol 
ID4024510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4441924 
End bp4442355 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content60% 
IMG OID637964196 
Producthypothetical protein 
Protein accessionYP_571113 
Protein GI91978454 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.11306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAGC ACTGCCTCTG GCGTTTCTCG CGGGCTTTGC ATCGCGCGCT TAACGAACGC 
CAACACGAAG ACCTGAGCAA CATGATCGAC GAGGATATCG ATTGGGCGAT CTACGGTCCG
ATCGACATGT TTCCGTTCTT CGGCGCGCGC CACGGCAAGG CGGCGGTGCT CGAGGTCTGC
CGGCAGATCG CCGACAACGT CCGCATCCAT CGCTTCGATC GCGAGGCGAT CATGCTCGGC
GTCGACACCT CCGCCTCGAT GATCCGCTAT TCGCTCACGG CGCTCGATTC CAACAAGCCG
ATCAGCCTGC GGATGGCGCA GTTCACGCAG TTCAAGGCCG GAAAGTTGGT GAGTATGCGG
ATCCTGATCG ACACGTTCGA TCTGGTCGAA CAGGCGATCG GCCATCCAAT CGATCTGCCG
CGGATCGCCT GA
 
Protein sequence
MTEHCLWRFS RALHRALNER QHEDLSNMID EDIDWAIYGP IDMFPFFGAR HGKAAVLEVC 
RQIADNVRIH RFDREAIMLG VDTSASMIRY SLTALDSNKP ISLRMAQFTQ FKAGKLVSMR
ILIDTFDLVE QAIGHPIDLP RIA