| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3978 |
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| Symbol | |
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| ID | 4024495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4426251 |
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| End bp | 4427165 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637964181 |
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| Product | transglutaminase-like |
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| Protein accession | YP_571098 |
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| Protein GI | 91978439 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.607439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGCTGC TGACGATCTA TCATCGAACC GAATATCATT ACGCCCACGC GGTCGCTTTC
GGCGAACACC GGGTGATGCT GCGGCCGCGC GACAGCCACG ATCTGCGGAT GCTGCAGGGC
GAGCTGGTGA TCACGCCGCA GCCGGCGTCG CTGCGCTGGA TCCATGACGT GTTCGGGAAC
AGCGTCGCGA TCGCGACCTT CGATCAGCGC GCGACCCAGC TGACGTTCGA TTCCACCGCG
ACCGTCGAGC ATCATCCGAG CGAGGAATTC GCGCTGACGC CGGACGATCC CGCGTTCTTC
TATCCGTTTT TCTACGACGA GGAGGAGTTC CCCGACCTCG AGCGGTTCAT CCGCCCGCAT
TACGGCGATC CGGACGGCGA GCTGGCGCGT TGGGCGCGCA GCTTTCTCGA CGCCCAGGGC
TCGACGCCGA CGTTCAAGAT TCTCAGCGGG CTCACTCACG GCATTCGCGC GGCGTTCAGC
TATCGCAAGC GCCACGCCCA CGGCACCCAG CATCCGCTCG ATACGCTGCA GACCGGCTCC
GGCAGTTGCC GTGATTTCGC GCTGCTGATG ATCGAGGCGC TGCGCCGGCT CGGCATCGCC
GCGCGGTTCG TCTCCGGCTA TCTGTTCGTG CATGGCGACC GCGCGCACGG CTATGTCGGC
GGCGGCTCGA CCCATGCCTG GGTGCAGGTC TATCTGCCGA GCGCCGGCTG GATCGAGTTC
GATCCGACCA ACGGCATCAT CGGCAATCGC GATCTGGTGC GGGTGGCGGT GGCGCGCGAT
CCGTATCAGG CGATCCCGCT GCACGGCAGC TATTTCGGCG GCGCCGACGC GTTTCTGCGG
ATGGACGTCA GCATCAACGT GGTCTCGGCC GGGGACGCCG CCGCGCGGGA ATTGACACCC
GCGGCCACGG ACTGA
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| Protein sequence | MPLLTIYHRT EYHYAHAVAF GEHRVMLRPR DSHDLRMLQG ELVITPQPAS LRWIHDVFGN
SVAIATFDQR ATQLTFDSTA TVEHHPSEEF ALTPDDPAFF YPFFYDEEEF PDLERFIRPH
YGDPDGELAR WARSFLDAQG STPTFKILSG LTHGIRAAFS YRKRHAHGTQ HPLDTLQTGS
GSCRDFALLM IEALRRLGIA ARFVSGYLFV HGDRAHGYVG GGSTHAWVQV YLPSAGWIEF
DPTNGIIGNR DLVRVAVARD PYQAIPLHGS YFGGADAFLR MDVSINVVSA GDAAARELTP
AATD
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