Gene RPD_3974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3974 
Symbol 
ID4024491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4424598 
End bp4424945 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content57% 
IMG OID637964177 
Producthypothetical protein 
Protein accessionYP_571094 
Protein GI91978435 
COG category[S] Function unknown 
COG ID[COG2929] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.789792 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGGAGC GCGCAATGCC CGACGAAAAC GACGTTGAAT TGGGACTACA GCGGCTAACT 
GGCTTCGAAT GGGACGTGGC GAAAAGCGAG GCCAACCTCA CGAAACATGG CCTCGATTTC
GACGAGGCGG CAGAGGTGTT CTACGATCGA GTCGCTCTCC GCCGATCGGA TCGCAACAAC
GAGGAGCGGT GGATCGCTGT CGGACTATCC CATGGTCGCA TCGTGTCGGT GATTTTCACC
CTCCGAGACG ACAAGATCAG GATCATCTCC GCGCGACATC CGAGACCCAA TGAAGAAAGA
GACTATCGTT ACGCGCAAAT GGGGCGACCG GAGGAAGGGC AAGACTGA
 
Protein sequence
MLERAMPDEN DVELGLQRLT GFEWDVAKSE ANLTKHGLDF DEAAEVFYDR VALRRSDRNN 
EERWIAVGLS HGRIVSVIFT LRDDKIRIIS ARHPRPNEER DYRYAQMGRP EEGQD